Strain identifier

BacDive ID: 7669

Type strain: No

Species: Micrococcus luteus

Strain Designation: Mercedita

Strain history: IAM 12009 <-- ATCC 7468 <-- W. C. Tobie strain Mercedita ("Sarcina subflava").

NCBI tax ID(s): 1270 (species)

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General

@ref: 828

BacDive-ID: 7669

DSM-Number: 1605

keywords: Bacteria, mesophilic

description: Micrococcus luteus Mercedita is a mesophilic bacterium of the family Micrococcaceae.

NCBI tax id

  • NCBI tax id: 1270
  • Matching level: species

strain history

@refhistory
828<- ATCC <- W.C. Tobie, Mercedita (Sarcina subflava)
67770IAM 12009 <-- ATCC 7468 <-- W. C. Tobie strain Mercedita ("Sarcina subflava").

doi: 10.13145/bacdive7669.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Micrococcus
  • species: Micrococcus luteus
  • full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Bacteridium luteum

@ref: 828

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micrococcaceae

genus: Micrococcus

species: Micrococcus luteus

full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 emend. Nouioui et al. 2018

strain designation: Mercedita

type strain: no

Culture and growth conditions

culture medium

  • @ref: 828
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
828positivegrowth30mesophilic
47535positivegrowth30mesophilic
67770positivegrowth30mesophilic

Physiology and metabolism

antibiogram

@refmediumPenicillin Goxacillinampicillinticarcillinmezlocillincefalotincefazolincefotaximeaztreonamimipenemtetracyclinechloramphenicolgentamycinamikacinvancomycinerythromycinlincomycinofloxacinnorfloxacincolistinpipemidic acidnitrofurantoinbacitracinpolymyxin bkanamycinneomycindoxycyclineceftriaxoneclindamycinfosfomycinmoxifloxacinlinezolidnystatinquinupristin/dalfopristinteicoplaninpiperacillin/tazobactamincubation temperatureoxygen condition
828Mueller-Hinton Agar382038-4040-4238-40383838050364028-3028-30264234-362020121083816-18242840-4234-364216-18303804026-2832
828Mueller-Hinton Agar24142830202222-2422-24030-322428-3016-1818143022014600221416-182022n.d.n.d.n.d.n.d.n.d.n.d.n.d.n.d.n.d.37
828Mueller Hinton34-361632363032343004232-343624-26282034-3632-342018-2010108301422-24203230-3234-36202838-40038202630aerob

compound production

  • @ref: 67770
  • compound: Restriction endonuclease

murein

  • @ref: 828
  • murein short key: A11. pep
  • type: A2 L-Lys peptide subunit

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837516199urea+hydrolysis
6837529016arginine+hydrolysis
6837518257ornithine+degradation
683754853esculin-hydrolysis
6837517634D-glucose-fermentation
6837515824D-fructose-fermentation
6837516024D-mannose-fermentation
6837517306maltose-fermentation
6837517716lactose-fermentation
6837527082trehalose-fermentation
6837516899D-mannitol-fermentation
6837516634raffinose-fermentation
6837516988D-ribose-fermentation
6837517057cellobiose-fermentation
6837517632nitrate-reduction
6837517992sucrose-fermentation
6837559640N-acetylglucosamine-fermentation
6837532528turanose-fermentation
6837522599arabinose-fermentation

antibiotic resistance

  • @ref: 68375
  • ChEBI: 28368
  • metabolite: novobiocin
  • is antibiotic: yes
  • is sensitive: yes
  • sensitivity conc.: 1.8 µg

metabolite production

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • production: no

metabolite tests

  • @ref: 68375
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
68375beta-glucuronidase-3.2.1.31
68375pyrrolidonyl arylamidase-3.4.19.3
68375alkaline phosphatase+3.1.3.1
68375L-arginine arylamidase+
68375beta-galactosidase-3.2.1.23
68375beta-glucosidase-3.2.1.21
68375ornithine decarboxylase+4.1.1.17
68375arginine dihydrolase+3.5.3.6
68375urease+3.5.1.5

API ID32STA

@refUREADH ArgODCESCGLUFRUMNEMALLACTREMANRAFRIBCELNITVPbeta GALArgAPALPyrANOVOSACNAGTURARAbeta GUR
47535+++--------------++-------

Safety information

risk assessment

  • @ref: 828
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

GC content

  • @ref: 67770
  • GC-content: 73.4

External links

@ref: 828

culture collection no.: CCUG 21987, DSM 1605, ATCC 7468, NRRL B-2619, PCI 1009, JCM 20344, BCRC 11544, CCM 1048, CECT 247, IAM 12009, IFO 12992, LMG 14459, NBRC 12992, NCIMB 8942, PCM 1143

straininfo link

  • @ref: 77112
  • straininfo: 92551

literature

  • topic: Enzymology
  • Pubmed-ID: 6282705
  • title: New restriction endonucleases from Flavobacterium okeanokoites (FokI) and Micrococcus luteus (MluI).
  • authors: Sugisaki H, Kanazawa S
  • journal: Gene
  • DOI: 10.1016/0378-1119(81)90062-7
  • year: 1981
  • mesh: *Bacterial Proteins, Base Sequence, DNA Restriction Enzymes/*isolation & purification/metabolism, DNA, Bacterial/metabolism, DNA, Viral/metabolism, *Deoxyribonucleases, Type II Site-Specific, Flavobacterium/*enzymology, Micrococcus/*enzymology
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
828Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1605)https://www.dsmz.de/collection/catalogue/details/culture/DSM-1605
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
47535Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 21987)https://www.ccug.se/strain?id=21987
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68375Automatically annotated from API ID32STA
77112Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID92551.1StrainInfo: A central database for resolving microbial strain identifiers