Strain identifier
BacDive ID: 7669
Type strain:
Species: Micrococcus luteus
Strain Designation: Mercedita
Strain history: IAM 12009 <-- ATCC 7468 <-- W. C. Tobie strain Mercedita ("Sarcina subflava").
NCBI tax ID(s): 1270 (species)
General
@ref: 828
BacDive-ID: 7669
DSM-Number: 1605
keywords: Bacteria, mesophilic
description: Micrococcus luteus Mercedita is a mesophilic bacterium of the family Micrococcaceae.
NCBI tax id
- NCBI tax id: 1270
- Matching level: species
strain history
@ref | history |
---|---|
828 | <- ATCC <- W.C. Tobie, Mercedita (Sarcina subflava) |
67770 | IAM 12009 <-- ATCC 7468 <-- W. C. Tobie strain Mercedita ("Sarcina subflava"). |
doi: 10.13145/bacdive7669.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Micrococcaceae
- genus: Micrococcus
- species: Micrococcus luteus
- full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacteridium luteum
@ref: 828
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Micrococcaceae
genus: Micrococcus
species: Micrococcus luteus
full scientific name: Micrococcus luteus (Schroeter 1872) Cohn 1872 emend. Nouioui et al. 2018
strain designation: Mercedita
type strain: no
Culture and growth conditions
culture medium
- @ref: 828
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
828 | positive | growth | 30 | mesophilic |
47535 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
Physiology and metabolism
antibiogram
@ref | medium | Penicillin G | oxacillin | ampicillin | ticarcillin | mezlocillin | cefalotin | cefazolin | cefotaxime | aztreonam | imipenem | tetracycline | chloramphenicol | gentamycin | amikacin | vancomycin | erythromycin | lincomycin | ofloxacin | norfloxacin | colistin | pipemidic acid | nitrofurantoin | bacitracin | polymyxin b | kanamycin | neomycin | doxycycline | ceftriaxone | clindamycin | fosfomycin | moxifloxacin | linezolid | nystatin | quinupristin/dalfopristin | teicoplanin | piperacillin/tazobactam | incubation temperature | oxygen condition |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
828 | Mueller-Hinton Agar | 38 | 20 | 38-40 | 40-42 | 38-40 | 38 | 38 | 38 | 0 | 50 | 36 | 40 | 28-30 | 28-30 | 26 | 42 | 34-36 | 20 | 20 | 12 | 10 | 8 | 38 | 16-18 | 24 | 28 | 40-42 | 34-36 | 42 | 16-18 | 30 | 38 | 0 | 40 | 26-28 | 32 | ||
828 | Mueller-Hinton Agar | 24 | 14 | 28 | 30 | 20 | 22 | 22-24 | 22-24 | 0 | 30-32 | 24 | 28-30 | 16-18 | 18 | 14 | 30 | 22 | 0 | 14 | 6 | 0 | 0 | 22 | 14 | 16-18 | 20 | 22 | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | n.d. | 37 | |
828 | Mueller Hinton | 34-36 | 16 | 32 | 36 | 30 | 32 | 34 | 30 | 0 | 42 | 32-34 | 36 | 24-26 | 28 | 20 | 34-36 | 32-34 | 20 | 18-20 | 10 | 10 | 8 | 30 | 14 | 22-24 | 20 | 32 | 30-32 | 34-36 | 20 | 28 | 38-40 | 0 | 38 | 20 | 26 | 30 | aerob |
compound production
- @ref: 67770
- compound: Restriction endonuclease
murein
- @ref: 828
- murein short key: A11. pep
- type: A2 L-Lys peptide subunit
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68375 | 16199 | urea | + | hydrolysis |
68375 | 29016 | arginine | + | hydrolysis |
68375 | 18257 | ornithine | + | degradation |
68375 | 4853 | esculin | - | hydrolysis |
68375 | 17634 | D-glucose | - | fermentation |
68375 | 15824 | D-fructose | - | fermentation |
68375 | 16024 | D-mannose | - | fermentation |
68375 | 17306 | maltose | - | fermentation |
68375 | 17716 | lactose | - | fermentation |
68375 | 27082 | trehalose | - | fermentation |
68375 | 16899 | D-mannitol | - | fermentation |
68375 | 16634 | raffinose | - | fermentation |
68375 | 16988 | D-ribose | - | fermentation |
68375 | 17057 | cellobiose | - | fermentation |
68375 | 17632 | nitrate | - | reduction |
68375 | 17992 | sucrose | - | fermentation |
68375 | 59640 | N-acetylglucosamine | - | fermentation |
68375 | 32528 | turanose | - | fermentation |
68375 | 22599 | arabinose | - | fermentation |
antibiotic resistance
- @ref: 68375
- ChEBI: 28368
- metabolite: novobiocin
- is antibiotic: yes
- is sensitive: yes
- sensitivity conc.: 1.8 µg
metabolite production
- @ref: 68375
- Chebi-ID: 15688
- metabolite: acetoin
- production: no
metabolite tests
- @ref: 68375
- Chebi-ID: 15688
- metabolite: acetoin
- voges-proskauer-test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68375 | beta-glucuronidase | - | 3.2.1.31 |
68375 | pyrrolidonyl arylamidase | - | 3.4.19.3 |
68375 | alkaline phosphatase | + | 3.1.3.1 |
68375 | L-arginine arylamidase | + | |
68375 | beta-galactosidase | - | 3.2.1.23 |
68375 | beta-glucosidase | - | 3.2.1.21 |
68375 | ornithine decarboxylase | + | 4.1.1.17 |
68375 | arginine dihydrolase | + | 3.5.3.6 |
68375 | urease | + | 3.5.1.5 |
API ID32STA
@ref | URE | ADH Arg | ODC | ESC | GLU | FRU | MNE | MAL | LAC | TRE | MAN | RAF | RIB | CEL | NIT | VP | beta GAL | ArgA | PAL | PyrA | NOVO | SAC | NAG | TUR | ARA | beta GUR |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
47535 | + | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | - | - |
Safety information
risk assessment
- @ref: 828
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
- @ref: 67770
- GC-content: 73.4
External links
@ref: 828
culture collection no.: CCUG 21987, DSM 1605, ATCC 7468, NRRL B-2619, PCI 1009, JCM 20344, BCRC 11544, CCM 1048, CECT 247, IAM 12009, IFO 12992, LMG 14459, NBRC 12992, NCIMB 8942, PCM 1143
straininfo link
- @ref: 77112
- straininfo: 92551
literature
- topic: Enzymology
- Pubmed-ID: 6282705
- title: New restriction endonucleases from Flavobacterium okeanokoites (FokI) and Micrococcus luteus (MluI).
- authors: Sugisaki H, Kanazawa S
- journal: Gene
- DOI: 10.1016/0378-1119(81)90062-7
- year: 1981
- mesh: *Bacterial Proteins, Base Sequence, DNA Restriction Enzymes/*isolation & purification/metabolism, DNA, Bacterial/metabolism, DNA, Viral/metabolism, *Deoxyribonucleases, Type II Site-Specific, Flavobacterium/*enzymology, Micrococcus/*enzymology
- topic2: Metabolism
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
828 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1605) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-1605 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
47535 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 21987) | https://www.ccug.se/strain?id=21987 | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
68375 | Automatically annotated from API ID32STA | |||
77112 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID92551.1 | StrainInfo: A central database for resolving microbial strain identifiers |