Strain identifier

BacDive ID: 7649

Type strain: No

Species: Kocuria rhizophila

Strain Designation: ES-145

Strain history: <- European Space Agency, Noordwijk, Netherlands; ES-145 <- C. Moissl-Eichinger, Univ. Regensburg, Germany

NCBI tax ID(s): 72000 (species)

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General

@ref: 17122

BacDive-ID: 7649

DSM-Number: 30763

keywords: 16S sequence, Bacteria, mesophilic

description: Kocuria rhizophila ES-145 is a mesophilic bacterium that was isolated from spacecraft-associated clean room class ISO 8, Herschel Space Observatory.

NCBI tax id

  • NCBI tax id: 72000
  • Matching level: species

strain history

  • @ref: 17122
  • history: <- European Space Agency, Noordwijk, Netherlands; ES-145 <- C. Moissl-Eichinger, Univ. Regensburg, Germany

doi: 10.13145/bacdive7649.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Kocuria
  • species: Kocuria rhizophila
  • full scientific name: Kocuria rhizophila Kovács et al. 1999

@ref: 17122

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micrococcaceae

genus: Kocuria

species: Kocuria rhizophila

full scientific name: Kocuria rhizophila Kovács et al. 1999

strain designation: ES-145

type strain: no

Morphology

multimedia

  • @ref: 17122
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_30763.jpg
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 17122
  • name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/220
  • composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

  • @ref: 17122
  • growth: positive
  • type: growth
  • temperature: 28

Isolation, sampling and environmental information

isolation

  • @ref: 17122
  • sample type: spacecraft-associated clean room class ISO 8, Herschel Space Observatory
  • geographic location: Noordwijk, European Space Research and Technology Centre
  • country: Netherlands
  • origin.country: NLD
  • continent: Europe

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Built environment
  • Cat3: #Clean room

taxonmaps

  • @ref: 69479
  • File name: preview.99_5667.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_424;97_481;98_552;99_5667&stattab=map
  • Last taxonomy: Kocuria
  • 16S sequence: EU934094
  • Sequence Identity:
  • Total samples: 11262
  • soil counts: 468
  • aquatic counts: 947
  • animal counts: 9694
  • plant counts: 153

Safety information

risk assessment

  • @ref: 17122
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 17122
  • description: Kocuria rhizophila strain ES_145con 16S ribosomal RNA gene, partial sequence
  • accession: EU934094
  • length: 1296
  • database: nuccore
  • NCBI tax ID: 72000

External links

@ref: 17122

culture collection no.: DSM 30763

straininfo link

  • @ref: 77093
  • straininfo: 406405

Reference

@idauthorscataloguedoi/urltitle
17122Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 30763)https://www.dsmz.de/collection/catalogue/details/culture/DSM-30763
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
77093Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID406405.1StrainInfo: A central database for resolving microbial strain identifiers