Strain identifier

BacDive ID: 7639

Type strain: No

Species: Kocuria rosea

Strain history: <- P. Schumann <- ATCC <- R.S. Breed, KSE (Sarcina erythromyxa) <- Kral Collection <- Migula

NCBI tax ID(s): 1275 (species)

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General

@ref: 4430

BacDive-ID: 7639

DSM-Number: 11630

keywords: 16S sequence, Bacteria, mesophilic

description: Kocuria rosea DSM 11630 is a mesophilic bacterium that was isolated from air.

NCBI tax id

  • NCBI tax id: 1275
  • Matching level: species

strain history

  • @ref: 4430
  • history: <- P. Schumann <- ATCC <- R.S. Breed, KSE (Sarcina erythromyxa) <- Kral Collection <- Migula

doi: 10.13145/bacdive7639.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Kocuria
  • species: Kocuria rosea
  • full scientific name: Kocuria rosea (Flügge 1886) Stackebrandt et al. 1995

  • synonyms

    @refsynonym
    20215Kocuria erythromyxa
    20215Deinococcus erythromyxa
    20215Micrococcus roseus
    20215Pelczaria aurantia

@ref: 4430

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micrococcaceae

genus: Kocuria

species: Kocuria rosea

full scientific name: Kocuria rosea (Flügge 1886) Stackebrandt et al. 1995

type strain: no

Culture and growth conditions

culture medium

  • @ref: 4430
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/92
  • composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

  • @ref: 4430
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

murein

  • @ref: 4430
  • murein short key: A11.06
  • type: A3alpha L-Lys-L-Ala3

Isolation, sampling and environmental information

isolation

  • @ref: 4430
  • sample type: air

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Air

taxonmaps

  • @ref: 69479
  • File name: preview.99_2760.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_424;97_1751;98_2142;99_2760&stattab=map
  • Last taxonomy: Kocuria
  • 16S sequence: Y11330
  • Sequence Identity:
  • Total samples: 7668
  • soil counts: 1344
  • aquatic counts: 794
  • animal counts: 4476
  • plant counts: 1054

Safety information

risk assessment

  • @ref: 4430
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: K.erythromyxa 16S rRNA gene
  • accession: Y11330
  • length: 1497
  • database: ena
  • NCBI tax ID: 1275

External links

@ref: 4430

culture collection no.: DSM 11630, ATCC 187, CCM 706

straininfo link

  • @ref: 77083
  • straininfo: 45457

literature

  • topic: Phylogeny
  • Pubmed-ID: 2115965
  • title: [Polyamines in representative taxa of coryneform and other bacteria].
  • authors: Gvozdiak OP, Chernaia NE
  • journal: Mikrobiol Zh
  • year: 1990
  • mesh: Actinomycetales/*analysis/classification, Electrophoresis, Paper, Erwinia/*analysis/classification, Micrococcus/*analysis/classification, Polyamines/*analysis, Staphylococcus aureus/*analysis/classification, Time Factors
  • topic2: Enzymology

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
4430Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11630)https://www.dsmz.de/collection/catalogue/details/culture/DSM-11630
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
77083Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID45457.1StrainInfo: A central database for resolving microbial strain identifiers