Strain identifier

BacDive ID: 7599

Type strain: Yes

Species: Arthrobacter dextranlyticum

Strain Designation: T6

Strain history: Y. Nogi <-- G. Okada <-- T. Sawai T6.

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General

@ref: 6189

BacDive-ID: 7599

DSM-Number: 15928

keywords: 16S sequence, Bacteria, mesophilic

description: Arthrobacter dextranlyticum T6 is a mesophilic bacterium that was isolated from garden soil.

strain history

@refhistory
6189<- Y. Nogi; T6 <- T. Sawai et al.
67770Y. Nogi <-- G. Okada <-- T. Sawai T6.

doi: 10.13145/bacdive7599.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Arthrobacter
  • species: Arthrobacter dextranlyticum
  • full scientific name: Arthrobacter dextranlyticum Hatada et al. 2004

@ref: 6189

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micrococcaceae

genus: Arthrobacter

species: Arthrobacter dextranlyticum

full scientific name: Arthrobacter dextranlyticum Hatada et al. 2004

strain designation: T6

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 6189
  • name: DEXTRAN MEDIUM (DSMZ Medium 1050)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1050
  • composition: Name: DEXTRAN MEDIUM (DSMZ Medium 1050) Composition: Agar 15.0 g/l Dextran 10.0 g/l Polypeptone 5.0 g/l NH4NO3 2.0 g/l KH2PO4 1.0 g/l MgSO4 x 7 H2O 0.5 g/l CaCl2 x 2 H2O 0.25 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
6189positivegrowth28mesophilic
67770positivegrowth30mesophilic

Physiology and metabolism

compound production

  • @ref: 67770
  • compound: Isomalto-dextranase

observation

  • @ref: 67770
  • observation: quinones: MK-9(H2)

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
6189garden soilNagoyaJapanJPNAsia
67770Garden soilNagoyaJapanJPNAsia

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Engineered#Agriculture#Garden

taxonmaps

  • @ref: 69479
  • File name: preview.99_4165.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_99;97_106;98_3145;99_4165&stattab=map
  • Last taxonomy: Micrococcaceae
  • 16S sequence: AB117515
  • Sequence Identity:
  • Total samples: 813
  • soil counts: 385
  • aquatic counts: 61
  • animal counts: 94
  • plant counts: 273

Sequence information

16S sequences

  • @ref: 6189
  • description: Arthrobacter dextranolyticus gene for 16S rRNA, partial sequence
  • accession: AB117515
  • length: 1414
  • database: ena
  • NCBI tax ID: 242599

GC content

  • @ref: 6189
  • GC-content: 66

External links

@ref: 6189

culture collection no.: DSM 15928, IAM 12103, NRRL B-4425, JCM 12217

Reference

@idauthorscataloguedoi/urltitle
6189Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 15928)https://www.dsmz.de/collection/catalogue/details/culture/DSM-15928
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta