Strain identifier

BacDive ID: 7562

Type strain: No

Species: Arthrobacter sp.

Strain Designation: FB24

Strain history: <- C. Nakatsu, Dept. Agronomy, Purdue Univ., West Lafayette, USA <- F. Beasley; FB24

NCBI tax ID(s): 1667 (species)

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General

@ref: 16404

BacDive-ID: 7562

DSM-Number: 22572

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Arthrobacter sp. FB24 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 1667
  • Matching level: species

strain history

  • @ref: 16404
  • history: <- C. Nakatsu, Dept. Agronomy, Purdue Univ., West Lafayette, USA <- F. Beasley; FB24

doi: 10.13145/bacdive7562.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Arthrobacter
  • species: Arthrobacter sp.
  • full scientific name: Arthrobacter Conn and Dimmick 1947 (Approved Lists 1980)

@ref: 16404

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micrococcaceae

genus: Arthrobacter

species: Arthrobacter sp.

full scientific name: Arthrobacter sp.

strain designation: FB24

type strain: no

Culture and growth conditions

culture medium

  • @ref: 16404
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/92
  • composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

  • @ref: 16404
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 16404
  • sample type: soil
  • geographic location: Indiana, Seymour, INDOT property
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_625.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_99;97_106;98_386;99_625&stattab=map
  • Last taxonomy: Arthrobacter
  • 16S sequence: DQ157992
  • Sequence Identity:
  • Total samples: 5810
  • soil counts: 2849
  • aquatic counts: 364
  • animal counts: 580
  • plant counts: 2017

Sequence information

16S sequences

  • @ref: 16404
  • description: Arthrobacter sp. FB24 16S ribosomal RNA gene, partial sequence
  • accession: DQ157992
  • length: 1516
  • database: ena
  • NCBI tax ID: 290399

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Arthrobacter sp. FB24GCA_000196235completencbi290399
66792Arthrobacter sp. FB24290399.46plasmidpatric290399
66792Arthrobacter sp. FB24290399.4completepatric290399
66792Arthrobacter sp. FB24290399.44plasmidpatric290399
66792Arthrobacter sp. FB24290399.45plasmidpatric290399
66792Arthrobacter sp. FB24639633006completeimg290399

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno88.359no
flagellatedno96.921no
gram-positiveyes93.902no
anaerobicno99.695no
aerobicyes96.281no
halophileno90.983no
spore-formingno83.83no
thermophileno98.915yes
glucose-utilyes83.15no
glucose-fermentno82.338no

External links

@ref: 16404

culture collection no.: DSM 22572

straininfo link

  • @ref: 77007
  • straininfo: 405003

Reference

@idauthorscataloguedoi/urltitle
16404Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22572)https://www.dsmz.de/collection/catalogue/details/culture/DSM-22572
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
77007Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID405003.1StrainInfo: A central database for resolving microbial strain identifiers