Archive BacDiveID:10.13145/bacdive754.20230509.8.1

Strain identifier

BacDive ID: 754

Type strain:

Species: Bacillus pumilus

Strain history: <- NCIB <- T. Varley, Wellcome Res. Labs., CN607

NCBI tax ID(s): 1408 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 657

BacDive-ID: 754

DSM-Number: 1794

keywords: Bacteria, mesophilic, human pathogen

description: Bacillus pumilus DSM 1794 is a mesophilic human pathogen that was isolated from soil.

NCBI tax id

NCBI tax id: 1408
Matching level: species

strain history

@ref: 657
history: <- NCIB <- T. Varley, Wellcome Res. Labs., CN607

doi: 10.13145/bacdive754.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/bacillota
domain: Bacteria
phylum: Bacillota
class: Bacilli
order: Caryophanales
family: Bacillaceae
genus: Bacillus
species: Bacillus pumilus
full scientific name: Bacillus pumilus Meyer and Gottheil 1901 (Approved Lists 1980)

@ref: 657

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Bacillus

species: Bacillus pumilus

full scientific name: Bacillus pumilus Meyer and Gottheil 1901

type strain: no

Culture and growth conditions

culture medium

@ref: 657
name: NUTRIENT AGAR (DSMZ Medium 1)
growth: yes
link: https://mediadive.dsmz.de/medium/1
composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

@ref: 657
growth: positive
type: growth
temperature: 30
range: mesophilic

Physiology and metabolism

antibiogram

@ref	medium	incubation temperature	oxygen condition	Penicillin G	oxacillin	ampicillin	ticarcillin	mezlocillin	cefalotin	cefazolin	cefotaxime	imipenem	tetracycline	chloramphenicol	gentamycin	amikacin	vancomycin	erythromycin	lincomycin	ofloxacin	norfloxacin	colistin	pipemidic acid	nitrofurantoin	bacitracin	polymyxin b	kanamycin	neomycin	doxycycline	ceftriaxone	clindamycin	moxifloxacin	linezolid	quinupristin/dalfopristin	teicoplanin	piperacillin/tazobactam
657	Mueller-Hinton Agar	30	aerob	44	34	42	48	38	46	40	10-12	44-46	36-38	24	28	30	26	32	6-8	34	30	8-10	18-20	24	10	14	30	24	40	20-22	20-22	38-40	40-42	24	20	34
657	Mueller-Hinton Agar			44-46	32	42	46	38	44-46	40	12	46	34	24	30	30	24	32-34	12	34	30	10	20	24	8	14	30	26	36-38	22	24	36-38	36	24-26	20	34
657	Mueller-Hinton Agar	30	aerob	40-42	30	38	44	34-36	42	36-38	8	42	32	22	26	28-30	22	28-30	8	32	28-30	10	16	22	8	12	28-30	24	36	14	20-22	36-38	38	24	20	30
657	Mueller-Hinton Agar	30	aerob	40-42	30	38	44	34-36	42	36-38	8	42	32	22	26	28-30	22	28-30	8	32	28-30	10	16	22	8	12	28-30	24	36	14	20-22	36-38	38	24	20	30

Isolation, sampling and environmental information

isolation

@ref: 657
sample type: soil

isolation source categories

Cat1: #Environmental
Cat2: #Terrestrial
Cat3: #Soil

Safety information

risk assessment

@ref: 657
pathogenicity human: yes, in single cases
biosafety level: 1
biosafety level comment: Risk group (German classification)

External links

@ref: 657

culture collection no.: DSM 1794, NCIB 10822, CN 607

straininfo link

@ref: 70428
straininfo: 93046

Reference

@id	authors	catalogue	doi/url	title
657	Curators of the DSMZ	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1794)	https://www.dsmz.de/collection/catalogue/details/culture/DSM-1794
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.		10.1099/ijsem.0.004332	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
70428	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.		10.60712/SI-ID93046.1	StrainInfo: A central database for resolving microbial strain identifiers