Strain identifier

BacDive ID: 7537

Type strain: No

Species: Acetobacterium tundrae

Strain history: <- NRRL <- Upjohn Comp., UC 3564 (Arthrobacter sp., N-18)

NCBI tax ID(s): 1667 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 394

BacDive-ID: 7537

DSM-Number: 917

keywords: Bacteria, mesophilic

description: Acetobacterium tundrae DSM 917 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 1667
  • Matching level: species

strain history

  • @ref: 394
  • history: <- NRRL <- Upjohn Comp., UC 3564 (Arthrobacter sp., N-18)

doi: 10.13145/bacdive7537.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Eubacteriaceae
  • genus: Acetobacterium
  • species: Acetobacterium tundrae
  • full scientific name: Acetobacterium tundrae Simankova et al. 2001

@ref: 394

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micrococcaceae

genus: Arthrobacter

species: Arthrobacter sp.

full scientific name: Arthrobacter sp.

type strain: no

Culture and growth conditions

culture medium

  • @ref: 394
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/92
  • composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

  • @ref: 394
  • growth: positive
  • type: growth
  • temperature: 30

Physiology and metabolism

compound production

  • @ref: 394
  • compound: novenamine

murein

  • @ref: 394
  • murein short key: A31
  • type: A1gamma m-Dpm-direct

Isolation, sampling and environmental information

isolation

  • @ref: 394
  • sample type: soil

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Genome-based predictions

predictions

@reftraitmodeldescriptionpredictionconfidencetraining_data
69480gram-positivegram-positivePositive reaction to Gram-stainingyes62.264no
69480anaerobicanaerobicAbility to grow under anoxygenic conditions (including facultative anaerobes)yes88.78no
69480spore-formingspore-formingAbility to form endo- or exosporesno51.831no
69480aerobicaerobicAbility to grow under oxygenic conditions (including facultative aerobes)no92.478no
69480thermophilicthermophileAbility to grow at temperatures above or equal to 45°Cno87.643yes
69480flagellatedmotile2+Ability to perform flagellated movementyes65.577no

External links

@ref: 394

culture collection no.: DSM 917, NRRL B-3652, UC 3564

straininfo link

  • @ref: 76982
  • straininfo: 47285

literature

  • topic: Genetics
  • Pubmed-ID: 31573151
  • title: Insights into the genome structure of four acetogenic bacteria with specific reference to the Wood-Ljungdahl pathway.
  • authors: Esposito A, Tamburini S, Triboli L, Ambrosino L, Chiusano ML, Jousson O
  • journal: Microbiologyopen
  • DOI: 10.1002/mbo3.938
  • year: 2019
  • mesh: Acetates/*metabolism, Acetobacterium/*genetics/*metabolism, Carbon Dioxide/*metabolism, Cluster Analysis, *Genome, Bacterial, Genome-Wide Association Study, *Genomics/methods, *Metabolic Networks and Pathways, Multigene Family, Protein Interaction Mapping
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
394Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 917)https://www.dsmz.de/collection/catalogue/details/culture/DSM-917
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
76982Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID47285.1StrainInfo: A central database for resolving microbial strain identifiers