Strain identifier
BacDive ID: 750
Type strain: 
Species: Bacillus pumilus
Strain Designation: 734, 736
Strain history: <- CCM <- G. Ivanovics <- N.R. Smith, 736 <- ATCC <- AMC <- AMNH, 734 <- W. Ford <- Kral (Bacillus megaterium)
NCBI tax ID(s): 1408 (species)
General
@ref: 146
BacDive-ID: 750
DSM-Number: 355
keywords: 16S sequence, Bacteria, mesophilic, human pathogen
description: Bacillus pumilus 734 is a mesophilic human pathogen of the family Bacillaceae.
NCBI tax id
- NCBI tax id: 1408
- Matching level: species
strain history
- @ref: 146
- history: <- CCM <- G. Ivanovics <- N.R. Smith, 736 <- ATCC <- AMC <- AMNH, 734 <- W. Ford <- Kral (Bacillus megaterium)
doi: 10.13145/bacdive750.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus pumilus
- full scientific name: Bacillus pumilus Meyer and Gottheil 1901 (Approved Lists 1980)
@ref: 146
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus pumilus
full scientific name: Bacillus pumilus Meyer and Gottheil 1901
strain designation: 734, 736
type strain: no
Culture and growth conditions
culture medium
- @ref: 146
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 146
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_885.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_17;97_607;98_698;99_885&stattab=map
- Last taxonomy: Bacillus
- 16S sequence: AB354235
- Sequence Identity:
- Total samples: 20329
- soil counts: 7187
- aquatic counts: 3497
- animal counts: 6743
- plant counts: 2902
Safety information
risk assessment
- @ref: 146
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Bacillus pumilus gene for 16S rRNA, partial sequence, strain: NBRC 12100 | AB354235 | 1474 | ena | 1408 |
| 20218 | Bacillus pumilus ATCC 72 16S rRNA gene, partial sequence | U02894 | 383 | ena | 1408 |
External links
@ref: 146
culture collection no.: DSM 355, ATCC 72, CCM 1697, IFO 12100, NBRC 12100
straininfo link
- @ref: 70424
- straininfo: 92768
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 146 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 355) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-355 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 70424 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID92768.1 | StrainInfo: A central database for resolving microbial strain identifiers |