Strain identifier

BacDive ID: 7403

Type strain: No

Species: Microbacterium resistens

Strain history: <- G. Funke, 1589 <- F.S. Nolte

NCBI tax ID(s): 156977 (species)

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General

@ref: 4572

BacDive-ID: 7403

DSM-Number: 11987

keywords: Bacteria, mesophilic

description: Microbacterium resistens DSM 11987 is a mesophilic bacterium that was isolated from blood culture, acute myelogenous leukemia.

NCBI tax id

  • NCBI tax id: 156977
  • Matching level: species

strain history

  • @ref: 4572
  • history: <- G. Funke, 1589 <- F.S. Nolte

doi: 10.13145/bacdive7403.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Microbacteriaceae
  • genus: Microbacterium
  • species: Microbacterium resistens
  • full scientific name: Microbacterium resistens (Funke et al. 1998) Behrendt et al. 2001

  • synonyms

    • @ref: 20215
    • synonym: Aureobacterium resistens

@ref: 4572

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Microbacteriaceae

genus: Microbacterium

species: Microbacterium resistens

full scientific name: Microbacterium resistens (Funke et al. 1998) Behrendt et al. 2001 emend. Nouioui et al. 2018

type strain: no

Culture and growth conditions

culture medium

  • @ref: 4572
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/92
  • composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

  • @ref: 4572
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

murein

  • @ref: 4572
  • murein short key: B09
  • type: B2alpha {Gly} [L-Orn] D-Glu-D-Orn

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose+fermentation
6837917716lactose+fermentation
6837917992sucrose+fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase+3.2.1.24
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase-3.1.3.1
68379catalase-1.11.1.6
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase+3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase+3.5.1.B15

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    54184C16:02.416
    54184C18:00.418
    54184C14:0 ISO0.613.618
    54184C15:0 ANTEISO30.514.711
    54184C15:0 ISO1.814.621
    54184C16:0 iso27.315.626
    54184C17:0 anteiso34.416.722
    54184C17:0 iso1.316.629
    54184C18:0 ISO0.217.632
    54184C18:2 ω6,9c/C18:0 ANTE0.717.724
    54184Unidentified0.313.743
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
54184-+-+-++++-+-----+++--

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
54184--++-+----++-+-++++-

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentsampling date
4572blood culture, acute myelogenous leukemiaAtlantaUSAUSANorth America
54184Human acute myelogenous leukemia,39-year-old maleAtlantaUSAUSANorth America1995

isolation source categories

  • Cat1: #Infection
  • Cat2: #Patient
  • Cat3: #Blood culture

Safety information

risk assessment

  • @ref: 4572
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

External links

@ref: 4572

culture collection no.: DSM 11987, CCUG 38311, NRRL B-24216, DMMZ 1589

straininfo link

  • @ref: 76852
  • straininfo: 49219

Reference

@idauthorscataloguedoi/urltitle
4572Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11987)https://www.dsmz.de/collection/catalogue/details/culture/DSM-11987
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
54184Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 38311)https://www.ccug.se/strain?id=38311
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
76852Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49219.1StrainInfo: A central database for resolving microbial strain identifiers