Strain identifier
BacDive ID: 7326
Type strain:
Species: Frigoribacterium faeni
Strain Designation: 227
Strain history: <- M.A. Andersson; 227
NCBI tax ID(s): 145483 (species)
version 8.1 (current version)
General
@ref: 3897
BacDive-ID: 7326
DSM-Number: 10310
keywords: 16S sequence, Bacteria, mesophilic
description: Frigoribacterium faeni 227 is a mesophilic bacterium that was isolated from hay dust.
NCBI tax id
- NCBI tax id: 145483
- Matching level: species
strain history
- @ref: 3897
- history: <- M.A. Andersson; 227
doi: 10.13145/bacdive7326.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Microbacteriaceae
- genus: Frigoribacterium
- species: Frigoribacterium faeni
- full scientific name: Frigoribacterium faeni Kämpfer et al. 2000
@ref: 3897
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Microbacteriaceae
genus: Frigoribacterium
species: Frigoribacterium faeni
full scientific name: Frigoribacterium faeni Kämpfer et al. 2000
strain designation: 227
type strain: no
Culture and growth conditions
culture medium
- @ref: 3897
- name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
- growth: yes
- link: https://mediadive.dsmz.de/medium/92
- composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
culture temp
- @ref: 3897
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Physiology and metabolism
murein
- @ref: 3897
- murein short key: B14
- type: B2ß {Gly} [L-Hsr] D-Glu-D-Lys
Isolation, sampling and environmental information
isolation
- @ref: 3897
- sample type: hay dust
- country: Finland
- origin.country: FIN
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Dust |
#Host | #Plants | #Herbaceous plants (Grass,Crops) |
taxonmaps
- @ref: 69479
- File name: preview.99_187.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_133;97_144;98_161;99_187&stattab=map
- Last taxonomy: Microbacteriaceae
- 16S sequence: AF157478
- Sequence Identity:
- Total samples: 14126
- soil counts: 4109
- aquatic counts: 1587
- animal counts: 4245
- plant counts: 4185
Safety information
risk assessment
- @ref: 3897
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 3897
- description: Frigoribacterium sp. 227 16S ribosomal RNA gene, partial sequence
- accession: AF157478
- length: 1467
- database: ena
- NCBI tax ID: 98158
GC content
- @ref: 3897
- GC-content: 70.6
- method: high performance liquid chromatography (HPLC)
External links
@ref: 3897
culture collection no.: DSM 10310
straininfo link
- @ref: 76776
- straininfo: 48805
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
3897 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 10310) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-10310 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
76776 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48805.1 | StrainInfo: A central database for resolving microbial strain identifiers |