Strain identifier
BacDive ID: 7059
Type strain: 
Species: Methanococcoides sp.
Strain Designation: HCM 6
Strain history: <- OCM <- J. Boone, HCM6
NCBI tax ID(s): 1966350 (species)
version 8.1 (current version)
General
@ref: 2965
BacDive-ID: 7059
DSM-Number: 7059
keywords: Archaea, anaerobe, mesophilic
description: Methanococcoides sp. HCM 6 is an anaerobe, mesophilic archaeon that was isolated from offshore oil well.
NCBI tax id
- NCBI tax id: 1966350
- Matching level: species
strain history
- @ref: 2965
- history: <- OCM <- J. Boone, HCM6
doi: 10.13145/bacdive7059.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Methanomicrobia
- order: Methanosarcinales
- family: Methanosarcinaceae
- genus: Methanococcoides
- species: Methanococcoides sp.
- full scientific name: Methanococcoides Sowers and Ferry 1985
@ref: 2965
domain: Archaea
phylum: Euryarchaeota
class: Methanomicrobia
order: Methanosarcinales
family: Methanosarcinaceae
genus: Methanococcoides
species: Methanococcoides sp.
full scientific name: Methanococcoides sp.
strain designation: HCM 6
type strain: no
Culture and growth conditions
culture medium
- @ref: 2965
- name: METHANOCOCCOIDES MEDIUM (DSMZ Medium 141c)
- growth: yes
- link: https://mediadive.dsmz.de/medium/141c
- composition: Name: METHANOCOCCOIDES MEDIUM (DSMZ Medium 141c) Composition: NaHCO3 4.89237 g/l Trimethylammonium chloride 4.89237 g/l MgCl2 x 6 H2O 3.91389 g/l Yeast extract 1.95695 g/l Trypticase peptone 1.95695 g/l Na-acetate 0.978474 g/l Na2S x 9 H2O 0.489237 g/l L-Cysteine HCl x H2O 0.489237 g/l KCl 0.332681 g/l NH4Cl 0.244618 g/l K2HPO4 0.136986 g/l MgSO4 x 7 H2O 0.0293542 g/l Nitrilotriacetic acid 0.0146771 g/l NaCl 0.00978474 g/l MnSO4 x H2O 0.00489237 g/l Fe(NH4)2(SO4)2 x 6 H2O 0.00195695 g/l CoSO4 x 7 H2O 0.00176125 g/l ZnSO4 x 7 H2O 0.00176125 g/l CaCl2 x 2 H2O 0.000978474 g/l FeSO4 x 7 H2O 0.000978474 g/l Sodium resazurin 0.000489237 g/l NiCl2 x 6 H2O 0.000293542 g/l AlK(SO4)2 x 12 H2O 0.000195695 g/l CuSO4 x 5 H2O 9.78474e-05 g/l Pyridoxine hydrochloride 9.78474e-05 g/l H3BO3 9.78474e-05 g/l Na2MoO4 x 2 H2O 9.78474e-05 g/l (DL)-alpha-Lipoic acid 4.89237e-05 g/l Thiamine HCl 4.89237e-05 g/l Riboflavin 4.89237e-05 g/l Nicotinic acid 4.89237e-05 g/l Calcium D-(+)-pantothenate 4.89237e-05 g/l p-Aminobenzoic acid 4.89237e-05 g/l Biotin 1.95695e-05 g/l Folic acid 1.95695e-05 g/l Na2WO4 x 2 H2O 3.91389e-06 g/l Na2SeO3 x 5 H2O 2.93542e-06 g/l Vitamin B12 9.78474e-07 g/l Distilled water
culture temp
- @ref: 2965
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 2965
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 2965
- sample type: offshore oil well
- geographic location: New Mexico, Roswell
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Industrial | #Oil reservoir |
| #Environmental | #Aquatic | #Marine |
External links
@ref: 2965
culture collection no.: DSM 7059, OCM 152
straininfo link
- @ref: 76516
- straininfo: 48353
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 2965 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7059) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-7059 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 76516 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48353.1 | StrainInfo: A central database for resolving microbial strain identifiers |