Strain identifier
BacDive ID: 7000
Type strain:
Species: Methanococcus aeolicus
Strain Designation: PL-15/H
Strain history: <- D. Boone and M. Kendall, Portland State Univ., USA; PL-15/H <- K. Stetter {1980}
NCBI tax ID(s): 42879 (species)
General
@ref: 6853
BacDive-ID: 7000
DSM-Number: 17251
keywords: 16S sequence, Archaea, anaerobe, mesophilic
description: Methanococcus aeolicus PL-15/H is an anaerobe, mesophilic archaeon that was isolated from marine sediment.
NCBI tax id
- NCBI tax id: 42879
- Matching level: species
strain history
- @ref: 6853
- history: <- D. Boone and M. Kendall, Portland State Univ., USA; PL-15/H <- K. Stetter {1980}
doi: 10.13145/bacdive7000.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Methanococci
- order: Methanococcales
- family: Methanococcaceae
- genus: Methanococcus
- species: Methanococcus aeolicus
- full scientific name: Methanococcus aeolicus Kendall et al. 2006
@ref: 6853
domain: Archaea
phylum: Euryarchaeota
class: Methanococci
order: Methanococcales
family: Methanococcaceae
genus: Methanococcus
species: Methanococcus aeolicus
full scientific name: Methanococcus aeolicus Kendall et al. 2006
strain designation: PL-15/H
type strain: no
Culture and growth conditions
culture medium
- @ref: 6853
- name: METHANOGENIUM MEDIUM (H2/CO2) (DSMZ Medium 141)
- growth: yes
- link: https://mediadive.dsmz.de/medium/141
- composition: Name: METHANOGENIUM MEDIUM (H2/CO2) (DSMZ Medium 141) Composition: NaHCO3 4.89237 g/l MgCl2 x 6 H2O 3.91389 g/l Yeast extract 1.95695 g/l Trypticase peptone 1.95695 g/l Na-acetate 0.978474 g/l Na2S x 9 H2O 0.489237 g/l L-Cysteine HCl x H2O 0.489237 g/l KCl 0.332681 g/l NH4Cl 0.244618 g/l K2HPO4 0.136986 g/l MgSO4 x 7 H2O 0.0293542 g/l Nitrilotriacetic acid 0.0146771 g/l NaCl 0.00978474 g/l MnSO4 x H2O 0.00489237 g/l Fe(NH4)2(SO4)2 x 6 H2O 0.00195695 g/l CoSO4 x 7 H2O 0.00176125 g/l ZnSO4 x 7 H2O 0.00176125 g/l FeSO4 x 7 H2O 0.000978474 g/l CaCl2 x 2 H2O 0.000978474 g/l Sodium resazurin 0.000489237 g/l NiCl2 x 6 H2O 0.000293542 g/l AlK(SO4)2 x 12 H2O 0.000195695 g/l CuSO4 x 5 H2O 9.78474e-05 g/l Pyridoxine hydrochloride 9.78474e-05 g/l Na2MoO4 x 2 H2O 9.78474e-05 g/l H3BO3 9.78474e-05 g/l Nicotinic acid 4.89237e-05 g/l Riboflavin 4.89237e-05 g/l (DL)-alpha-Lipoic acid 4.89237e-05 g/l Thiamine HCl 4.89237e-05 g/l Calcium D-(+)-pantothenate 4.89237e-05 g/l p-Aminobenzoic acid 4.89237e-05 g/l Folic acid 1.95695e-05 g/l Biotin 1.95695e-05 g/l Na2WO4 x 2 H2O 3.91389e-06 g/l Na2SeO3 x 5 H2O 2.93542e-06 g/l Vitamin B12 9.78474e-07 g/l Distilled water
culture temp
- @ref: 6853
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 6853
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 6853
- sample type: marine sediment
- geographic location: Lipari Islands near Sicily
- country: Italy
- origin.country: ITA
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Aquatic | #Marine |
#Environmental | #Aquatic | #Sediment |
taxonmaps
- @ref: 69479
- File name: preview.99_190190.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17939;96_70207;97_91176;98_123904;99_190190&stattab=map
- Last taxonomy: Methanococcus
- 16S sequence: DQ136171
- Sequence Identity:
- Total samples: 15
- aquatic counts: 8
- animal counts: 7
Safety information
risk assessment
- @ref: 6853
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 6853
- description: Methanococcus aeolicus strain PL-15/HP 16S ribosomal RNA gene, partial sequence
- accession: DQ136171
- length: 1393
- database: ena
- NCBI tax ID: 42879
External links
@ref: 6853
culture collection no.: DSM 17251, OCM 836
straininfo link
- @ref: 76461
- straininfo: 399706
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Enzymology | 6324124 | Three new restriction endonucleases MaeI, MaeII and MaeIII from Methanococcus aeolicus. | Schmid K, Thomm M, Laminet A, Laue FG, Kessler C, Stetter KO, Schmitt R | Nucleic Acids Res | 10.1093/nar/12.6.2619 | 1984 | Base Sequence, DNA Restriction Enzymes/*isolation & purification/metabolism, *Deoxyribonucleases, Type II Site-Specific, Euryarchaeota/*enzymology, Kinetics, Substrate Specificity | Phylogeny |
Phylogeny | 16825624 | Methanococcus aeolicus sp. nov., a mesophilic, methanogenic archaeon from shallow and deep marine sediments. | Kendall MM, Liu Y, Sieprawska-Lupa M, Stetter KO, Whitman WB, Boone DR | Int J Syst Evol Microbiol | 10.1099/ijs.0.64216-0 | 2006 | Archaeal Proteins/analysis, Base Composition, DNA, Archaeal/chemistry/isolation & purification, DNA, Ribosomal/chemistry/isolation & purification, Genes, rRNA, Geologic Sediments/*microbiology, Mediterranean Sea, Methanococcus/chemistry/*classification/*isolation & purification/physiology, Molecular Sequence Data, Pacific Ocean, Phylogeny, Proteome/analysis, RNA, Archaeal/genetics, RNA, Ribosomal, 16S/genetics, Seawater/microbiology, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, Temperature, Water Microbiology | Enzymology |
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
6853 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17251) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-17251 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
76461 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID399706.1 | StrainInfo: A central database for resolving microbial strain identifiers |