Strain identifier

BacDive ID: 698

Type strain: No

Species: Bacillus licheniformis

Strain Designation: 51.1

Strain history: CIP <- 2003, C. Parini, Milan Univ., Milan, Italy: strain 51.1

NCBI tax ID(s): 1402 (species)

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General

@ref: 4625

BacDive-ID: 698

DSM-Number: 12370

keywords: Bacteria, facultative anaerobe, spore-forming, thermophilic, Gram-positive, motile, rod-shaped, human pathogen

description: Bacillus licheniformis 51.1 is a facultative anaerobe, spore-forming, thermophilic human pathogen that was isolated from soil.

NCBI tax id

  • NCBI tax id: 1402
  • Matching level: species

strain history

@refhistory
367032003, C. Parini, Milano, Italy: strain 51.1
4625<- C. Parini; 51.1
120595CIP <- 2003, C. Parini, Milan Univ., Milan, Italy: strain 51.1

doi: 10.13145/bacdive698.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus licheniformis
  • full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Clostridium licheniforme

@ref: 4625

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Bacillus

species: Bacillus licheniformis

full scientific name: Bacillus licheniformis (Weigmann 1898) Chester 1901

strain designation: 51.1

type strain: no

Morphology

cell morphology

  • @ref: 120595
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 120595

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
36703MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
4625NUTRIENT AGAR (DSMZ Medium 1)yesName: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/1
120595CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
4625positivegrowth42thermophilic
36703positivegrowth37mesophilic
120595positivegrowth22-55
120595nogrowth10psychrophilic

culture pH

  • @ref: 120595
  • ability: positive
  • type: growth
  • pH: 6

Physiology and metabolism

oxygen tolerance

  • @ref: 120595
  • oxygen tolerance: facultative anaerobe

spore formation

  • @ref: 120595
  • spore formation: yes

halophily

  • @ref: 120595
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-10 %

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate+builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose+builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose+builds acid from32528
68371gentiobiose+builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch+builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin+builds acid from15443
68371trehalose+builds acid from27082
68371sucrose+builds acid from17992
68371melibiose-builds acid from28053
68371lactose+builds acid from17716
68371maltose+builds acid from17306
68371cellobiose+builds acid from17057
68371salicin+builds acid from17814
68371esculin+builds acid from4853
68371arbutin+builds acid from18305
68371amygdalin+builds acid from27613
68371N-acetylglucosamine+builds acid from59640
68371methyl alpha-D-glucopyranoside+builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol+builds acid from16899
68371myo-inositol+builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose+builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose+builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose+builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose+builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose+builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol+builds acid from17754
120595citrate+carbon source16947
120595esculin+hydrolysis4853
120595hippurate+hydrolysis606565
120595nitrate+reduction17632
120595nitrite+reduction16301
120595nitrate+respiration17632

metabolite production

  • @ref: 120595
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
12059515688acetoin+
12059517234glucose+

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase-3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
120595oxidase-
120595beta-galactosidase+3.2.1.23
120595alcohol dehydrogenase+1.1.1.1
120595gelatinase+
120595amylase+
120595DNase+
120595caseinase-3.4.21.50
120595catalase+1.11.1.6
120595tween esterase-
120595gamma-glutamyltransferase+2.3.2.2
120595lecithinase-
120595lipase-
120595lysine decarboxylase-4.1.1.18
120595ornithine decarboxylase-4.1.1.17
120595protease-
120595urease+3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
120595-+++------++---++---

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
120595+--+++---++++-+-++--+++++++++-+++--+--++-+----+--

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
120595+++++--+-++++--+++++++++------++++++-----+-++--++++--+-+---++------------+++---++-+---+-+++++++-+++

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentisolation date
4625soilHarvey BagAustraliaAUSAustralia and Oceania
120595Environment, SoilHarvey bayAustraliaAUSAustralia and Oceania1995

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

@refpathogenicity humanbiosafety levelbiosafety level comment
4625yes, in single cases1Risk group (German classification)
1205951Risk group (French classification)

Sequence information

GC content

  • @ref: 4625
  • GC-content: 47
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 4625

culture collection no.: DSM 12370, CIP 108209

straininfo link

  • @ref: 70373
  • straininfo: 49280

Reference

@idauthorscataloguedoi/urltitle
4625Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 12370)https://www.dsmz.de/collection/catalogue/details/culture/DSM-12370
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
36703Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/5806
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
70373Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49280.1StrainInfo: A central database for resolving microbial strain identifiers
120595Curators of the CIPCollection of Institut Pasteur (CIP 108209)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20108209