Strain identifier
BacDive ID: 6946
Type strain: 
Species: Methanobacterium congolense
Strain Designation: C
Strain history: <- J.-L. Garcia; C
NCBI tax ID(s): 118062 (species)
version 7.1 (current version)
General
@ref: 2982
BacDive-ID: 6946
DSM-Number: 7095
keywords: 16S sequence, Archaea, anaerobe, mesophilic
description: Methanobacterium congolense C is an anaerobe, mesophilic archaeon that was isolated from methanogenic digestor fed with cassava peel.
NCBI tax id
- NCBI tax id: 118062
- Matching level: species
strain history: <- J.-L. Garcia; C
doi: 10.13145/bacdive6946.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/euryarchaeota
- domain: Archaea
- phylum: Euryarchaeota
- class: Methanobacteria
- order: Methanobacteriales
- family: Methanobacteriaceae
- genus: Methanobacterium
- species: Methanobacterium congolense
- full scientific name: Methanobacterium congolense Cuzin et al. 2001
@ref: 2982
domain: Archaea
phylum: Euryarchaeota
class: Methanobacteria
order: Methanobacteriales
family: Methanobacteriaceae
genus: Methanobacterium
species: Methanobacterium congolense
full scientific name: Methanobacterium congolense Cuzin et al. 2001
strain designation: C
type strain: yes
Morphology
cell morphology
- @ref: 69480
- gram stain: negative
- confidence: 97.263
colony morphology
- @ref: 2982
- incubation period: 2-3 days
Culture and growth conditions
culture medium
- @ref: 2982
- name: METHANOBACTERIUM MEDIUM (DSMZ Medium 119)
- growth: yes
- link: https://mediadive.dsmz.de/medium/119
- composition: Name: METHANOBACTERIUM MEDIUM (DSMZ Medium 119) Composition: NaHCO3 3.98804 g/l Na-formate 1.99402 g/l Na-acetate 0.997009 g/l Na2S x 9 H2O 0.498504 g/l L-Cysteine HCl x H2O 0.498504 g/l KH2PO4 0.498504 g/l NH4Cl 0.398804 g/l NaCl 0.398804 g/l MgSO4 x 7 H2O 0.398804 g/l Yeast extract 0.199402 g/l CaCl2 x 2 H2O 0.0498504 g/l HCl 0.00249252 g/l FeSO4 x 7 H2O 0.00199402 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l H3BO3 5.98205e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Isobutyric acid DL-2-Methylbutyric acid Valeric acid Isovaleric acid H2SO4 Sludge Distilled water
culture temp
- @ref: 2982
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance | confidence |
|---|---|---|
| 2982 | anaerobe | |
| 69480 | anaerobe | 99.598 |
spore formation
- @ref: 69480
- spore formation: no
- confidence: 93.817
halophily
- @ref: 69480
- halophily level: non-halophilic
- confidence: 90.957
Isolation, sampling and environmental information
isolation
- @ref: 2982
- sample type: methanogenic digestor fed with cassava peel
- country: Congo, Republic of the
- continent: Africa
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Biodegradation | #Anaerobic digestor |
| #Host Body-Site | #Plant | #Fruit (Seed) |
Safety information
risk assessment
- @ref: 2982
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 2982
- description: Methanobacterium congolense 16S ribosomal RNA gene, partial sequence
- accession: AF233586
- length: 1453
- database: ena
- NCBI tax ID: 118062
GC content
- @ref: 2982
- GC-content: 40
External links
@ref: 2982
culture collection no.: DSM 7095, NBRC 105227
straininfo link
- @ref: 20218
- passport: http://www.straininfo.net/strains/160531
literature
- topic: Phylogeny
- Pubmed-ID: 11321095
- title: Methanobacterium congolense sp. nov., from a methanogenic fermentation of cassava peel.
- authors: Cuzin N, Ouattara AS, Labat M, Garcia JL
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/00207713-51-2-489
- year: 2001
- mesh: Bioreactors, DNA, Ribosomal, *Fermentation, Food Handling, Manihot/*microbiology, Methanobacterium/*classification/isolation & purification, Molecular Sequence Data, RNA, Ribosomal, 16S, Terminology as Topic
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 2982 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7095) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-7095 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) |