Strain identifier

BacDive ID: 6942

Type strain: Yes

Species: Methanobacterium espanolae

Strain Designation: GP9

Strain history: <- G.B. Patel, GP9

NCBI tax ID(s): 83565 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 2409

BacDive-ID: 6942

DSM-Number: 5982

keywords: 16S sequence, Archaea, anaerobe, mesophilic

description: Methanobacterium espanolae GP9 is an anaerobe, mesophilic archaeon that was isolated from anoxic primary sludge, bleach kraft mill.

NCBI tax id

  • NCBI tax id: 83565
  • Matching level: species

strain history

  • @ref: 2409
  • history: <- G.B. Patel, GP9

doi: 10.13145/bacdive6942.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/methanobacteriota
  • domain: Archaea
  • phylum: Methanobacteriota
  • class: Methanobacteria
  • order: Methanobacteriales
  • family: Methanobacteriaceae
  • genus: Methanobacterium
  • species: Methanobacterium espanolae
  • full scientific name: Methanobacterium espanolae Patel et al. 1990

@ref: 2409

domain: Archaea

phylum: Euryarchaeota

class: Methanobacteria

order: Methanobacteriales

family: Methanobacteriaceae

genus: Methanobacterium

species: Methanobacterium espanolae

full scientific name: Methanobacterium espanolae Patel et al. 1990

strain designation: GP9

type strain: yes

Morphology

colony morphology

  • @ref: 2409
  • incubation period: 2-3 days

Culture and growth conditions

culture medium

  • @ref: 2409
  • name: METHANOBACTERIUM ESPANOLAE MEDIUM (DSMZ Medium 506)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/506
  • composition: Name: METHANOBACTERIUM ESPANOLAE MEDIUM (DSMZ Medium 506) Composition: Na-acetate x 3 H2O 2.4728 g/l Na2CO3 0.49456 g/l (NH4)2SO4 0.445104 g/l K2HPO4 0.286845 g/l Na2S x 9 H2O 0.24728 g/l L-Cysteine HCl x H2O 0.24728 g/l KH2PO4 0.178042 g/l MgSO4 x 7 H2O 0.0296736 g/l Nitrilotriacetic acid 0.0148368 g/l NaCl 0.0098912 g/l MnSO4 x H2O 0.0049456 g/l ZnSO4 x 7 H2O 0.00178042 g/l CoSO4 x 7 H2O 0.00178042 g/l CaCl2 x 2 H2O 0.00098912 g/l FeSO4 x 7 H2O 0.00098912 g/l Sodium resazurin 0.00049456 g/l NiCl2 x 6 H2O 0.000296736 g/l AlK(SO4)2 x 12 H2O 0.000197824 g/l CuSO4 x 5 H2O 9.8912e-05 g/l H3BO3 9.8912e-05 g/l Na2MoO4 x 2 H2O 9.8912e-05 g/l Pyridoxine hydrochloride 9.8912e-05 g/l Nicotinic acid 4.9456e-05 g/l (DL)-alpha-Lipoic acid 4.9456e-05 g/l Riboflavin 4.9456e-05 g/l Thiamine HCl 4.9456e-05 g/l Calcium D-(+)-pantothenate 4.9456e-05 g/l p-Aminobenzoic acid 4.9456e-05 g/l Biotin 1.97824e-05 g/l Folic acid 1.97824e-05 g/l Na2WO4 x 2 H2O 3.95648e-06 g/l Na2SeO3 x 5 H2O 2.96736e-06 g/l Vitamin B12 9.8912e-07 g/l Distilled water

culture temp

  • @ref: 2409
  • growth: positive
  • type: growth
  • temperature: 35
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 2409
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 2409
  • sample type: anoxic primary sludge, bleach kraft mill
  • country: Canada
  • origin.country: CAN
  • continent: North America

isolation source categories

Cat1Cat2Cat3
#Engineered#Industrial
#Environmental#Terrestrial#Mud (Sludge)
#Condition#Anoxic (anaerobic)

Safety information

risk assessment

  • @ref: 2409
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 2409
  • description: Methanobacterium espanolae 16S small subunit ribosomal RNA gene, partial sequence
  • accession: AF095260
  • length: 1428
  • database: ena
  • NCBI tax ID: 83565

GC content

  • @ref: 2409
  • GC-content: 34.0

External links

@ref: 2409

culture collection no.: DSM 5982, NBRC 105228, NRC 5912

straininfo link

  • @ref: 76404
  • straininfo: 48036

Reference

@idauthorscataloguedoi/urltitle
2409Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 5982)https://www.dsmz.de/collection/catalogue/details/culture/DSM-5982
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
76404Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID48036.1StrainInfo: A central database for resolving microbial strain identifiers