Strain identifier

BacDive ID: 6937

Type strain: No

Species: Methanobacterium sp.

Strain history: <- D.R. Boone, CB12

NCBI tax ID(s): 2164 (species)

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General

@ref: 1448

BacDive-ID: 6937

DSM-Number: 3664

keywords: 16S sequence, Archaea, anaerobe, thermophilic

description: Methanobacterium sp. DSM 3664 is an anaerobe, thermophilic archaeon that was isolated from mesophilic biogas plant.

NCBI tax id

  • NCBI tax id: 2164
  • Matching level: species

strain history

  • @ref: 1448
  • history: <- D.R. Boone, CB12

doi: 10.13145/bacdive6937.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/methanobacteriota
  • domain: Archaea
  • phylum: Methanobacteriota
  • class: Methanobacteria
  • order: Methanobacteriales
  • family: Methanobacteriaceae
  • genus: Methanobacterium
  • species: Methanobacterium sp.
  • full scientific name: Methanobacterium Kluyver and van Niel 1936 (Approved Lists 1980)

@ref: 1448

domain: Archaea

phylum: Euryarchaeota

class: Methanobacteria

order: Methanobacteriales

family: Methanobacteriaceae

genus: Methanobacterium

species: Methanobacterium sp.

full scientific name: Methanobacterium sp.

type strain: no

Culture and growth conditions

culture medium

  • @ref: 1448
  • name: METHANOBACTERIUM MEDIUM (DSMZ Medium 119)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/119
  • composition: Name: METHANOBACTERIUM MEDIUM (DSMZ Medium 119) Composition: NaHCO3 3.98804 g/l Na-formate 1.99402 g/l Na-acetate 0.997009 g/l Na2S x 9 H2O 0.498504 g/l L-Cysteine HCl x H2O 0.498504 g/l KH2PO4 0.498504 g/l NH4Cl 0.398804 g/l NaCl 0.398804 g/l MgSO4 x 7 H2O 0.398804 g/l Yeast extract 0.199402 g/l CaCl2 x 2 H2O 0.0498504 g/l HCl 0.00249252 g/l FeSO4 x 7 H2O 0.00199402 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l H3BO3 5.98205e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Isobutyric acid DL-2-Methylbutyric acid Valeric acid Isovaleric acid H2SO4 Sludge Distilled water

culture temp

  • @ref: 1448
  • growth: positive
  • type: growth
  • temperature: 55-60
  • range: thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 1448
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 1448
  • sample type: mesophilic biogas plant
  • geographic location: Chengdu
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Engineered#Industrial#Plant (Factory)
#Engineered#Waste#Waste gas

Sequence information

16S sequences

  • @ref: 20218
  • description: Enterococcus faecalis clone OCM036 16S ribosomal RNA gene, partial sequence
  • accession: GU417224
  • length: 456
  • database: ena
  • NCBI tax ID: 1351

External links

@ref: 1448

culture collection no.: DSM 3664, ATCC 43574, OCM 36, CB 12

straininfo link

  • @ref: 76400
  • straininfo: 47741

literature

  • topic: Metabolism
  • Pubmed-ID: 8368842
  • title: Effects of hydrogen and formate on the degradation of propionate and butyrate in thermophilic granules from an upflow anaerobic sludge blanket reactor.
  • authors: Schmidt JE, Ahring BK
  • journal: Appl Environ Microbiol
  • DOI: 10.1128/aem.59.8.2546-2551.1993
  • year: 1993
  • mesh: Anaerobiosis, Bacillaceae/metabolism, Biodegradation, Environmental/drug effects, Butyrates/*metabolism, Butyric Acid, Formates/pharmacology, Hydrogen/pharmacology, Methanobacterium/metabolism, Propionates/*metabolism, *Waste Disposal, Fluid
  • topic2: Pathogenicity

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
1448Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 3664)https://www.dsmz.de/collection/catalogue/details/culture/DSM-3664
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
76400Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID47741.1StrainInfo: A central database for resolving microbial strain identifiers