Strain identifier

BacDive ID: 6929

Type strain: No

Species: Methanobacterium formicicum

Strain Designation: T1N

Strain history: <- M. K. Jain, T1N

NCBI tax ID(s): 2162 (species)

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General

@ref: 2582

BacDive-ID: 6929

DSM-Number: 6298

keywords: Archaea, anaerobe, mesophilic

description: Methanobacterium formicicum T1N is an anaerobe, mesophilic archaeon that was isolated from biomethanation granules.

NCBI tax id

  • NCBI tax id: 2162
  • Matching level: species

strain history

  • @ref: 2582
  • history: <- M. K. Jain, T1N

doi: 10.13145/bacdive6929.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/methanobacteriota
  • domain: Archaea
  • phylum: Methanobacteriota
  • class: Methanobacteria
  • order: Methanobacteriales
  • family: Methanobacteriaceae
  • genus: Methanobacterium
  • species: Methanobacterium formicicum
  • full scientific name: Methanobacterium formicicum Schnellen 1947 (Approved Lists 1980)

@ref: 2582

domain: Archaea

phylum: Euryarchaeota

class: Methanobacteria

order: Methanobacteriales

family: Methanobacteriaceae

genus: Methanobacterium

species: Methanobacterium formicicum

full scientific name: Methanobacterium formicicum Schnellen 1947 emend. Judicial Commission 1992

strain designation: T1N

type strain: no

Culture and growth conditions

culture medium

  • @ref: 2582
  • name: METHANOBACTERIUM MEDIUM (DSMZ Medium 119)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/119
  • composition: Name: METHANOBACTERIUM MEDIUM (DSMZ Medium 119) Composition: NaHCO3 3.98804 g/l Na-formate 1.99402 g/l Na-acetate 0.997009 g/l Na2S x 9 H2O 0.498504 g/l L-Cysteine HCl x H2O 0.498504 g/l KH2PO4 0.498504 g/l NH4Cl 0.398804 g/l NaCl 0.398804 g/l MgSO4 x 7 H2O 0.398804 g/l Yeast extract 0.199402 g/l CaCl2 x 2 H2O 0.0498504 g/l HCl 0.00249252 g/l FeSO4 x 7 H2O 0.00199402 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l H3BO3 5.98205e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Isobutyric acid DL-2-Methylbutyric acid Valeric acid Isovaleric acid H2SO4 Sludge Distilled water

culture temp

  • @ref: 2582
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 2582
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 2582
  • sample type: biomethanation granules
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

  • Cat1: #Host
  • Cat2: #Microbial

Safety information

risk assessment

  • @ref: 2582
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

GC content

  • @ref: 2582
  • GC-content: 45.8

External links

@ref: 2582

culture collection no.: DSM 6298

straininfo link

  • @ref: 76393
  • straininfo: 48146

Reference

@idauthorscataloguedoi/urltitle
2582Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6298)https://www.dsmz.de/collection/catalogue/details/culture/DSM-6298
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
76393Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID48146.1StrainInfo: A central database for resolving microbial strain identifiers