Strain identifier

BacDive ID: 6905

Type strain: Yes

Species: Methanobacterium bryantii

Strain Designation: M.o.H.

Strain history: <- T Türkes, Institut für Mikrobiologie und Weinforschung, Mainz, Germany <- Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH <- University of Illinois, Departments of Dairy Science and Microbiology, Urbana, USA; M.o.H. {1967} <- H. A. Barker, University of California, Berkeley, USA (Methanobacterium omelianskii)

NCBI tax ID(s): 2161 (species)

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General

@ref: 466

BacDive-ID: 6905

DSM-Number: 863

keywords: genome sequence, 16S sequence, Archaea, anaerobe, mesophilic

description: Methanobacterium bryantii M.o.H. is an anaerobe, mesophilic archaeon that was isolated from syntrophic culture of "Methanobacterium omelianskii".

NCBI tax id

  • NCBI tax id: 2161
  • Matching level: species

strain history

  • @ref: 466
  • history: <- T Türkes, Institut für Mikrobiologie und Weinforschung, Mainz, Germany <- Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH <- University of Illinois, Departments of Dairy Science and Microbiology, Urbana, USA; M.o.H. {1967} <- H. A. Barker, University of California, Berkeley, USA (Methanobacterium omelianskii)

doi: 10.13145/bacdive6905.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/methanobacteriota
  • domain: Archaea
  • phylum: Methanobacteriota
  • class: Methanobacteria
  • order: Methanobacteriales
  • family: Methanobacteriaceae
  • genus: Methanobacterium
  • species: Methanobacterium bryantii
  • full scientific name: Methanobacterium bryantii Balch and Wolfe 1981

@ref: 466

domain: Archaea

phylum: Euryarchaeota

class: Methanobacteria

order: Methanobacteriales

family: Methanobacteriaceae

genus: Methanobacterium

species: Methanobacterium bryantii

full scientific name: Methanobacterium bryantii Balch and Wolfe 1981 emend. Judicial Commission 1992

strain designation: M.o.H.

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
466MODIFIED METHANOBACTERIUM MEDIUM (DSMZ Medium 1523)yeshttps://mediadive.dsmz.de/medium/1523Name: MODIFIED METHANOBACTERIUM MEDIUM (DSMZ Medium 1523) Composition: Brain heart infusion 5.98802 g/l Proteose peptone 5.98802 g/l NaHCO3 3.99202 g/l Yeast extract 1.99601 g/l Na-formate 1.99601 g/l Na-acetate 0.998004 g/l Na2S x 9 H2O 0.499002 g/l KH2PO4 0.499002 g/l L-Cysteine HCl x H2O 0.499002 g/l MgSO4 x 7 H2O 0.399202 g/l NH4Cl 0.399202 g/l NaCl 0.399202 g/l CaCl2 x 2 H2O 0.0499002 g/l HCl 0.00249501 g/l FeCl2 x 4 H2O 0.00149701 g/l Sodium resazurin 0.000499002 g/l Pyridoxine hydrochloride 0.000299401 g/l Thiamine-HCl x 2 H2O 0.000199601 g/l Nicotinic acid 0.000199601 g/l CoCl2 x 6 H2O 0.000189621 g/l Calcium pantothenate 9.98004e-05 g/l Vitamin B12 9.98004e-05 g/l MnCl2 x 4 H2O 9.98004e-05 g/l p-Aminobenzoic acid 7.98403e-05 g/l ZnCl2 6.98603e-05 g/l Na2MoO4 x 2 H2O 3.59281e-05 g/l NiCl2 x 6 H2O 2.39521e-05 g/l D-(+)-biotin 1.99601e-05 g/l H3BO3 5.98802e-06 g/l CuCl2 x 2 H2O 1.99601e-06 g/l Distilled water
466METHANOBACTERIUM MEDIUM (DSMZ Medium 119)yeshttps://mediadive.dsmz.de/medium/119Name: METHANOBACTERIUM MEDIUM (DSMZ Medium 119) Composition: NaHCO3 3.98804 g/l Na-formate 1.99402 g/l Na-acetate 0.997009 g/l Na2S x 9 H2O 0.498504 g/l L-Cysteine HCl x H2O 0.498504 g/l KH2PO4 0.498504 g/l NH4Cl 0.398804 g/l NaCl 0.398804 g/l MgSO4 x 7 H2O 0.398804 g/l Yeast extract 0.199402 g/l CaCl2 x 2 H2O 0.0498504 g/l HCl 0.00249252 g/l FeSO4 x 7 H2O 0.00199402 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l H3BO3 5.98205e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Isobutyric acid DL-2-Methylbutyric acid Valeric acid Isovaleric acid H2SO4 Sludge Distilled water

culture temp

  • @ref: 466
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 466
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 466
  • sample type: syntrophic culture of "Methanobacterium omelianskii"
  • host species: Methanobacterium omelianskii

isolation source categories

Cat1Cat2Cat3
#Engineered#Laboratory#Lab enrichment
#Host#Microbial#Bacteria

Safety information

risk assessment

  • @ref: 466
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Methanobacterium bryantii 16S ribosomal RNAM591241480ena2161
466Methanobacterium bryantii strain MOH 16S ribosomal RNA gene, partial sequenceAY1966571260ena2161

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Methanobacterium bryantii M.o.H.GCA_002287175contigncbi2161
66792Methanobacterium bryantii M.o.H.2791355014draftimg2161

GC content

  • @ref: 466
  • GC-content: 32.7

External links

@ref: 466

culture collection no.: DSM 863, ATCC 33272, OCM 110

straininfo link

  • @ref: 76369
  • straininfo: 265715

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Enzymology16347558Relationship of Intracellular Coenzyme F(420) Content to Growth and Metabolic Activity of Methanobacterium bryantii and Methanosarcina barkeri.Heine-Dobbernack E, Schoberth SM, Sahm HAppl Environ Microbiol10.1128/aem.54.2.454-459.19881988
Phylogeny20173003Methanobacterium arcticum sp. nov., a methanogenic archaeon from Holocene Arctic permafrost.Shcherbakova V, Rivkina E, Pecheritsyna S, Laurinavichius K, Suzina N, Gilichinsky DInt J Syst Evol Microbiol10.1099/ijs.0.021311-02010Base Composition, Carbon Dioxide/metabolism, Cluster Analysis, DNA, Archaeal/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Hydrogen/metabolism, Hydrogen-Ion Concentration, Methanobacterium/*classification/genetics/*isolation & purification, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, TemperatureMetabolism

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
466Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 863)https://www.dsmz.de/collection/catalogue/details/culture/DSM-863
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
76369Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID265715.1StrainInfo: A central database for resolving microbial strain identifiers