Strain identifier

BacDive ID: 6867

Type strain: Yes

Species: Brochothrix thermosphacta

Strain Designation: SW 26

Culture col. no.: DSM 20171, ATCC 11509, NCDO 1676, NCIB 10018, WDCM 00071, CCUG 35132, CCM 4769

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General

@ref: 8602

BacDive-ID: 6867

DSM-Number: 20171

keywords: aerobe, Bacteria, 16S sequence, genome sequence, mesophilic

description: Brochothrix thermosphacta SW 26 is an aerobe, mesophilic bacterium that was isolated from fresh pork sausage.

strain history: <- ATCC <- W.L. Sulzbacher, SW 26 (Microbacterium thermosphactum)

doi: 10.13145/bacdive6867.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/firmicutes
  • domain: Bacteria
  • phylum: Firmicutes
  • class: Bacilli
  • order: Caryophanales
  • family: Listeriaceae
  • genus: Brochothrix
  • species: Brochothrix thermosphacta
  • full scientific name: Brochothrix thermosphacta (McLean and Sulzbacher 1953) Sneath and Jones 1976 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Microbacterium thermosphactum

@ref: 8602

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Listeriaceae

genus: Brochothrix

species: Brochothrix thermosphacta

full scientific name: Brochothrix thermosphacta (McLean and Sulzbacher 1953) Sneath and Jones 1976

strain designation: SW 26

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
8602CORYNEBACTERIUM AGAR (DSMZ Medium 53)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium53.pdf
41801MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)

culture temp

@refgrowthtypetemperaturerange
8602positivegrowth30mesophilic
41801positivegrowth25mesophilic
52541positivegrowth22-30

Physiology and metabolism

oxygen tolerance

  • @ref: 52541
  • oxygen tolerance: aerobe

compound production

  • @ref: 8602
  • compound: restriction endonuclease MthI

murein

  • @ref: 8602
  • murein short key: A31
  • type: A1gamma m-Dpm-direct

Isolation, sampling and environmental information

isolation

@refsample type
8602fresh pork sausage
52541Pork sausage,fresh

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Food production
  • Cat3: #Meat

Safety information

risk assessment

  • @ref: 8602
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Brochothrix thermosphacta strain ATCC 11509 16S ribosomal RNA gene, partial sequenceHQ8909421429ena1121126
20218Brochothrix thermosphacta 16S ribosomal RNAM587981552ena2756
20218Brochothrix thermosphacta isolate DSMZ 20171 16S ribosomal RNA gene, partial sequenceAY5430231421ena2756
20218Brochothrix thermosphacta gene for 16S rRNA, partial sequence, strain: NBRC 12167AB6802481473ena1121126
20218B.thermosphacta gene for 16S ribosomal RNAX561551470ena1121126

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Brochothrix thermosphacta DSM 20171 = FSL F6-1036GCA_000620985scaffoldncbi1121126
66792Brochothrix thermosphacta BIGCA_002381265completencbi2756
66792Brochothrix thermosphacta BIIGCA_002442515completencbi2756
66792Brochothrix thermosphacta TMW 2.1572GCA_001703535completencbi2756
66792Brochothrix thermosphacta CD 337GCA_900332045completencbi2756
66792Brochothrix thermosphacta TMW 2.1564GCA_001703515completencbi2756
66792Brochothrix thermosphacta DSM 20171 = FSL F6-1036GCA_001715655scaffoldncbi1121126
66792Brochothrix thermosphacta DSM 20171 = FSL F6-1036GCA_000525935contigncbi1121126
66792Brochothrix thermosphacta Bth-7810GCA_001715725contigncbi2756
66792Brochothrix thermosphacta Bth-7809GCA_001715665scaffoldncbi2756
66792Brochothrix thermosphacta Bth-7806GCA_001715735contigncbi2756
66792Brochothrix thermosphacta Bth-7807GCA_001715635contigncbi2756
66792Brochothrix thermosphacta Bth-7804GCA_001715835scaffoldncbi2756
66792Brochothrix thermosphacta TMW 2.2101GCA_009295555contigncbi2756
66792Brochothrix thermosphacta TAP 175GCA_900332055contigncbi2756
66792Brochothrix thermosphacta EBP 3070GCA_900332075contigncbi2756
66792Brochothrix thermosphacta BSAS1 3GCA_900332065contigncbi2756
66792Brochothrix thermosphacta HO01GCA_900218095contigncbi2756
66792Brochothrix thermosphacta Bth-7808GCA_001715715contigncbi2756
66792Brochothrix thermosphacta Bth-7803GCA_001715645contigncbi2756
66792Brochothrix thermosphacta Bth-7816GCA_001715785contigncbi2756
66792Brochothrix thermosphacta Bth-7818GCA_001715775contigncbi2756
66792Brochothrix thermosphacta Bth-7813GCA_001716015contigncbi2756
66792Brochothrix thermosphacta Bth-7811GCA_001715795contigncbi2756
66792Brochothrix thermosphacta UBA11068GCA_003538445scaffoldncbi2756
66792Brochothrix thermosphacta UBA11066GCA_003537455scaffoldncbi2756
66792Brochothrix thermosphacta DSM 201711121126.4wgspatric1121126
66792Brochothrix thermosphacta DSM 20171 = FSL F6-10361121126.7wgspatric1121126
66792Brochothrix thermosphacta DSM 20171 = FSL F6-10361121126.5wgspatric1121126
66792Brochothrix thermosphacta strain BI2756.26completepatric2756
66792Brochothrix thermosphacta strain BII2756.27completepatric2756
66792Brochothrix thermosphacta strain BSAS1 32756.36wgspatric2756
66792Brochothrix thermosphacta strain Bth-78032756.10wgspatric2756
66792Brochothrix thermosphacta strain Bth-78042756.18wgspatric2756
66792Brochothrix thermosphacta strain Bth-78062756.14wgspatric2756
66792Brochothrix thermosphacta strain Bth-78072756.9wgspatric2756
66792Brochothrix thermosphacta strain Bth-78082756.12wgspatric2756
66792Brochothrix thermosphacta strain Bth-78092756.11wgspatric2756
66792Brochothrix thermosphacta strain Bth-78102756.13wgspatric2756
66792Brochothrix thermosphacta strain Bth-78112756.17wgspatric2756
66792Brochothrix thermosphacta strain Bth-78132756.19wgspatric2756
66792Brochothrix thermosphacta strain Bth-78162756.16wgspatric2756
66792Brochothrix thermosphacta strain Bth-78182756.15wgspatric2756
66792Brochothrix thermosphacta strain CD 3372756.34completepatric2756
66792Brochothrix thermosphacta strain EBP 30702756.37wgspatric2756
66792Brochothrix thermosphacta strain HO012756.29wgspatric2756
66792Brochothrix thermosphacta strain TAP 1752756.35wgspatric2756
66792Brochothrix thermosphacta strain TMW 2.15642756.33completepatric2756
66792Brochothrix thermosphacta strain TMW 2.15722756.32completepatric2756
66792Brochothrix thermosphacta strain TMW 2.21012756.40wgspatric2756
66792Brochothrix thermosphacta strain UBA110662756.30wgspatric2756
66792Brochothrix thermosphacta strain UBA110682756.31wgspatric2756
66792Brochothrix thermosphacta DSM 201712556921092permanentimg1121126

GC content

  • @ref: 8602
  • GC-content: 36.1

External links

@ref: 8602

culture collection no.: DSM 20171, ATCC 11509, NCDO 1676, NCIB 10018, WDCM 00071, CCUG 35132, CCM 4769

straininfo link

@refpassport
20218http://www.straininfo.net/strains/35785
20218http://www.straininfo.net/strains/35782
20218http://www.straininfo.net/strains/129457
20218http://www.straininfo.net/strains/95741
20218http://www.straininfo.net/strains/866271

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8602Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20171)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20171
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
41801Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15028
52541Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 35132)https://www.ccug.se/strain?id=35132
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)