Strain identifier
BacDive ID: 6831
Type strain:
Species: Leuconostoc pseudomesenteroides
Strain Designation: 798
Strain history: CIP <- 1989, NCIB, Leuconostoc pseudomesenteroides <- 1950, NCTC <- strain 798
NCBI tax ID(s): 33968 (species)
General
@ref: 2265
BacDive-ID: 6831
DSM-Number: 5624
keywords: genome sequence, 16S sequence, Bacteria, facultative anaerobe, mesophilic, Gram-positive, ovoid-shaped, human pathogen
description: Leuconostoc pseudomesenteroides 798 is a facultative anaerobe, mesophilic, Gram-positive human pathogen of the family Lactobacillaceae.
NCBI tax id
- NCBI tax id: 33968
- Matching level: species
strain history
@ref | history |
---|---|
2265 | <- NCDO <- NCIB 3740 <- NCTC 3740 <- ATCC (Leuconostoc dextranicum) |
67770 | CIP 103325 <-- NCIB 3740 <-- NCTC 3740 <-- ATCC (Leuconostoc dextranicum). |
120902 | CIP <- 1989, NCIB, Leuconostoc pseudomesenteroides <- 1950, NCTC <- strain 798 |
doi: 10.13145/bacdive6831.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Leuconostoc
- species: Leuconostoc pseudomesenteroides
- full scientific name: Leuconostoc pseudomesenteroides Farrow et al. 1989
@ref: 2265
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Leuconostocaceae
genus: Leuconostoc
species: Leuconostoc pseudomesenteroides
full scientific name: Leuconostoc pseudomesenteroides Farrow et al. 1989
strain designation: 798
type strain: no
Morphology
cell morphology
- @ref: 120902
- gram stain: positive
- cell shape: ovoid-shaped
- motility: no
colony morphology
- @ref: 120902
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
2265 | MRS MEDIUM (DSMZ Medium 11) | yes | https://mediadive.dsmz.de/medium/11 | Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water |
35529 | MEDIUM 40- for Lactobacillus and Leuconostoc | yes | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |
120902 | CIP Medium 40 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=40 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
2265 | positive | growth | 30 | mesophilic |
35529 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 25 | mesophilic |
120902 | positive | growth | 10-37 | |
120902 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 120902
- oxygen tolerance: facultative anaerobe
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
120902 | NaCl | positive | growth | 0-8 % |
120902 | NaCl | no | growth | 10 % |
metabolite utilization
@ref | metabolite | utilization activity | kind of utilization tested | Chebi-ID |
---|---|---|---|---|
68371 | Potassium 5-ketogluconate | + | builds acid from | |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | gluconate | + | builds acid from | 24265 |
68371 | L-arabitol | - | builds acid from | 18403 |
68371 | D-arabitol | - | builds acid from | 18333 |
68371 | L-fucose | - | builds acid from | 18287 |
68371 | D-fucose | - | builds acid from | 28847 |
68371 | D-tagatose | - | builds acid from | 16443 |
68371 | D-lyxose | - | builds acid from | 62318 |
68371 | turanose | + | builds acid from | 32528 |
68371 | gentiobiose | - | builds acid from | 28066 |
68371 | xylitol | - | builds acid from | 17151 |
68371 | glycogen | - | builds acid from | 28087 |
68371 | starch | - | builds acid from | 28017 |
68371 | raffinose | + | builds acid from | 16634 |
68371 | melezitose | - | builds acid from | 6731 |
68371 | inulin | - | builds acid from | 15443 |
68371 | trehalose | + | builds acid from | 27082 |
68371 | sucrose | + | builds acid from | 17992 |
68371 | melibiose | + | builds acid from | 28053 |
68371 | lactose | - | builds acid from | 17716 |
68371 | maltose | + | builds acid from | 17306 |
68371 | salicin | + | builds acid from | 17814 |
68371 | N-acetylglucosamine | + | builds acid from | 59640 |
68371 | methyl alpha-D-glucopyranoside | + | builds acid from | 320061 |
68371 | methyl alpha-D-mannoside | - | builds acid from | 43943 |
68371 | D-sorbitol | - | builds acid from | 17924 |
68371 | D-mannitol | - | builds acid from | 16899 |
68371 | myo-inositol | - | builds acid from | 17268 |
68371 | galactitol | - | builds acid from | 16813 |
68371 | L-rhamnose | - | builds acid from | 62345 |
68371 | L-sorbose | - | builds acid from | 17266 |
68371 | D-mannose | + | builds acid from | 16024 |
68371 | D-fructose | + | builds acid from | 15824 |
68371 | D-glucose | + | builds acid from | 17634 |
68371 | D-galactose | - | builds acid from | 12936 |
68371 | methyl beta-D-xylopyranoside | - | builds acid from | 74863 |
68371 | ribitol | - | builds acid from | 15963 |
68371 | L-xylose | - | builds acid from | 65328 |
68371 | D-xylose | + | builds acid from | 65327 |
68371 | D-ribose | + | builds acid from | 16988 |
68371 | L-arabinose | + | builds acid from | 30849 |
68371 | D-arabinose | - | builds acid from | 17108 |
68371 | erythritol | - | builds acid from | 17113 |
68371 | glycerol | - | builds acid from | 17754 |
120902 | nitrate | - | reduction | 17632 |
120902 | nitrite | - | reduction | 16301 |
120902 | nitrate | + | respiration | 17632 |
antibiotic resistance
- @ref: 120902
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: no
- is resistant: yes
metabolite tests
@ref | Chebi-ID | metabolite | voges-proskauer-test | methylred-test |
---|---|---|---|---|
120902 | 15688 | acetoin | - | |
120902 | 17234 | glucose | + |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68382 | alpha-fucosidase | - | 3.2.1.51 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | beta-glucosidase | + | 3.2.1.21 |
68382 | alpha-glucosidase | + | 3.2.1.20 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | trypsin | - | 3.4.21.4 |
68382 | cystine arylamidase | + | 3.4.11.3 |
68382 | valine arylamidase | - | |
68382 | leucine arylamidase | - | 3.4.11.1 |
68382 | lipase (C 14) | - | |
68382 | esterase lipase (C 8) | - | |
68382 | esterase (C 4) | - | |
68382 | alkaline phosphatase | - | 3.1.3.1 |
120902 | oxidase | - | |
120902 | alcohol dehydrogenase | - | 1.1.1.1 |
120902 | gelatinase | - | |
120902 | caseinase | + | 3.4.21.50 |
120902 | catalase | - | 1.11.1.6 |
120902 | lysine decarboxylase | - | 4.1.1.18 |
120902 | ornithine decarboxylase | - | 4.1.1.17 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
120902 | - | - | - | - | - | - | - | + | - | - | + | + | - | - | - | + | + | - | - | - |
API 50CHac
@ref | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
120902 | - | - | - | + | + | + | - | - | - | - | + | + | + | - | - | - | - | - | - | - | + | + | +/- | +/- | +/- | + | +/- | + | - | + | + | + | - | - | + | - | - | - | - | + | - | - | - | - | - | - | + | - | + |
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_41.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_22;96_35;97_36;98_39;99_41&stattab=map
- Last taxonomy: Leuconostoc
- 16S sequence: LC260035
- Sequence Identity:
- Total samples: 44756
- soil counts: 3647
- aquatic counts: 6333
- animal counts: 32069
- plant counts: 2707
Safety information
risk assessment
@ref | pathogenicity human | biosafety level | biosafety level comment |
---|---|---|---|
2265 | yes, in single cases | 1 | Risk group (German classification) |
120902 | 1 | Risk group (French classification) |
Sequence information
16S sequences
- @ref: 67770
- description: Leuconostoc mesenteroides subsp. mesenteroides gene for 16S ribosomal RNA, partial sequence, strain: JCM 11045
- accession: LC260035
- length: 1489
- database: ena
- NCBI tax ID: 33967
Genome sequences
- @ref: 66792
- description: Leuconostoc falkenbergense strain FDAARGOS_1201
- accession: 2766470.4
- assembly level: complete
- database: patric
- NCBI tax ID: 2766470
GC content
- @ref: 2265
- GC-content: 40.6
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
motile | no | 95.254 | no |
gram-positive | yes | 97.062 | no |
anaerobic | no | 93.713 | no |
halophile | yes | 95.868 | no |
spore-forming | no | 94.92 | no |
glucose-util | yes | 89.269 | no |
flagellated | no | 97.994 | no |
aerobic | no | 95.198 | no |
thermophile | no | 99.734 | yes |
glucose-ferment | yes | 88.874 | no |
External links
@ref: 2265
culture collection no.: DSM 5624, NCDO 1590, NCIB 3740, JCM 11045, CIP 103325, NCIMB 3740, NCTC 3740
straininfo link
- @ref: 76296
- straininfo: 47959
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
2265 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 5624) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-5624 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
35529 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/15110 | ||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
68371 | Automatically annotated from API 50CH acid | |||
68382 | Automatically annotated from API zym | |||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
76296 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47959.1 | StrainInfo: A central database for resolving microbial strain identifiers | |
120902 | Curators of the CIP | Collection of Institut Pasteur (CIP 103325) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103325 |