Strain identifier

BacDive ID: 6802

Type strain: Yes

Species: Leptospira weilii

Strain Designation: Celledoni, LEP 1202

Strain history: CIP <- 2002, D. Postic, Inst. Pasteur, Paris, France: strain Celledoni

NCBI tax ID(s): 28184 (species)

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General

@ref: 16181

BacDive-ID: 6802

DSM-Number: 22357

keywords: 16S sequence, Bacteria, mesophilic

description: Leptospira weilii Celledoni is a mesophilic bacterium that was isolated from human blood.

NCBI tax id

  • NCBI tax id: 28184
  • Matching level: species

strain history

@refhistory
16181<- R. Galloway, CDC <- Walter Reed Army Institute of Research <- D.J.W. Smith
123921CIP <- 2002, D. Postic, Inst. Pasteur, Paris, France: strain Celledoni

doi: 10.13145/bacdive6802.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/spirochaetota
  • domain: Bacteria
  • phylum: Spirochaetota
  • class: Spirochaetia
  • order: Leptospirales
  • family: Leptospiraceae
  • genus: Leptospira
  • species: Leptospira weilii
  • full scientific name: Leptospira weilii Yasuda et al. 1987

@ref: 16181

domain: Bacteria

phylum: Spirochaetes

class: Spirochaetia

order: Spirochaetales

family: Leptospiraceae

genus: Leptospira

species: Leptospira weilii

full scientific name: Leptospira weilii Yasuda et al. 1987

strain designation: Celledoni, LEP 1202

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
16181LEPTOSPIRA-MEDIUM (DSMZ Medium 1113)yeshttps://mediadive.dsmz.de/medium/1113Name: LEPTOSPIRA-MEDIUM (DSMZ Medium 1113) Composition: Leptospira Medium Base EMJH 2.3 g/l Agarose 1.5 g/l Leptospira Enrichment EMJH Distilled water
123921CIP Medium 189yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=189

culture temp

@refgrowthtypetemperaturerange
16181positivegrowth30mesophilic
123921positivegrowth29mesophilic

Physiology and metabolism

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose-builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose-builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose-builds acid from15824
68371D-glucose-builds acid from17634
68371D-galactose-builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose-builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
123921-------------------------------------------------

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentisolation date
16181human bloodNorth QueenslandAustraliaAUSAustralia and Oceania
123921HumanAustraliaAUSAustralia and Oceania1952

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood

taxonmaps

  • @ref: 69479
  • File name: preview.99_502.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_26;96_43;97_45;98_49;99_502&stattab=map
  • Last taxonomy: Leptospira
  • 16S sequence: AY631877
  • Sequence Identity:
  • Total samples: 200
  • soil counts: 25
  • aquatic counts: 109
  • animal counts: 54
  • plant counts: 12

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
161812Risk group (German classification)
1239212Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Leptospira weilii Cellidoni (ATCC 43285) 16S rRNA gene, partial sequenceU126761483ena28184
16181Leptospira weilii serovar Celledoni strain Celledoni 16S ribosomal RNA gene, partial sequenceAY6318771431ena293063

External links

@ref: 16181

culture collection no.: DSM 22357, ATCC 43285, CRBIP6.1202

straininfo link

  • @ref: 76270
  • straininfo: 41755

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
16181Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22357)https://www.dsmz.de/collection/catalogue/details/culture/DSM-22357
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
68371Automatically annotated from API 50CH acid
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
76270Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID41755.1StrainInfo: A central database for resolving microbial strain identifiers
123921Curators of the CIPCollection of Institut Pasteur (CRBIP6.1202)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CRBIP6.1202