Strain identifier

BacDive ID: 6763

Type strain: Yes

Species: Legionella londiniensis

Strain Designation: 1477

Strain history: CIP <- 1997, CDC <- W.L. thacker: strain 1477 <- P.J. Dennis

NCBI tax ID(s): 45068 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 15587

BacDive-ID: 6763

DSM-Number: 21234

keywords: genome sequence, 16S sequence, Bacteria, microaerophile, mesophilic, Gram-negative

description: Legionella londiniensis 1477 is a microaerophile, mesophilic, Gram-negative bacterium that was isolated from office building cooling tower.

NCBI tax id

  • NCBI tax id: 45068
  • Matching level: species

strain history

@refhistory
15587<- CIP; strain 1477 {2008} <- CDC <- W. L. Thacker <- P. J. Dennis
120645CIP <- 1997, CDC <- W.L. thacker: strain 1477 <- P.J. Dennis

doi: 10.13145/bacdive6763.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Legionellales
  • family: Legionellaceae
  • genus: Legionella
  • species: Legionella londiniensis
  • full scientific name: Legionella londiniensis Dennis et al. 1993

@ref: 15587

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Legionellales

family: Legionellaceae

genus: Legionella

species: Legionella londiniensis

full scientific name: Legionella londiniensis Dennis et al. 1993

strain designation: 1477

type strain: yes

Morphology

cell morphology

@refgram stainconfidencecell shapemotility
69480negative99.997
120645negativerod-shapedno

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
15587BCYE-AGAR (DSMZ Medium 585)yeshttps://mediadive.dsmz.de/medium/585Name: BCYE AGAR (DSMZ Medium 585) Composition: OXOID Legionella CYE-Agar base
39215MEDIUM 23 - for Afipia and LegionellayesDistilled water make up to (1000.000 ml);Legionella agar (37.000 g);Legionella - enrichment mixture (10.000 ml)

culture temp

@refgrowthtypetemperaturerange
15587positivegrowth37mesophilic
39215positivegrowth37mesophilic
56533positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 56533
  • oxygen tolerance: microaerophile

spore formation

@refspore formationconfidence
69481no100
69480no99.986

enzymes

@refvalueactivityec
15587catalase+1.11.1.6
15587cytochrome-c oxidase-1.9.3.1

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    56533C14:00.414
    56533C15:01.715
    56533C16:013.416
    56533C17:0317
    56533C18:03.618
    56533C19:01.119
    56533C20:0120
    56533C14:0 ISO0.213.618
    56533C14:1 ω5c0.313.899
    56533C15:0 ANTEISO6.814.711
    56533C15:0 ISO0.514.621
    56533C15:1 ω6c2.514.856
    56533C16:0 iso10.315.626
    56533C16:1 ω7c35.415.819
    56533C17:0 anteiso17.716.722
    56533C17:0 iso116.629
    56533C17:1 ω9c ISO0.716.416
    56533C18:0 ISO0.317.632
    56533C19:0 ANTEISO0.318.729
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinentgeographic location
15587office building cooling towerUnited KingdomGBREurope
56533Cooling tower,office buildingUnited KingdomGBREuropeEngland,London
120645Office building cooling towerUnited KingdomGBREuropeLondon

isolation source categories

Cat1Cat2Cat3
#Engineered#Built environment#House
#Engineered#Industrial#Cooling tower

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
155871Risk group (German classification)
1206452Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
15587Legionella nautarum gene for ribosomal RNA, small subunitZ497281393ena45070
15587Legionella londiniensis 16S ribosomal RNA gene, partial sequenceAF129525671ena45068

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Legionella londiniensis 1477GCA_900639885contigncbi45068
66792Legionella londiniensis ATCC 49505GCA_001467825scaffoldncbi45068
66792Legionella londiniensis strain ATCC 4950545068.5wgspatric45068
66792Legionella londiniensis ATCC 495052660237932draftimg45068

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
flagellatedno97.224no
gram-positiveno98.635no
anaerobicno97.315no
aerobicno92.938no
halophileno78.788no
spore-formingno95.702no
glucose-utilyes71.531no
motileno77.828no
thermophileno91.389no
glucose-fermentno89.699no

External links

@ref: 15587

culture collection no.: DSM 21234, ATCC 49505, CCUG 44895, CIP 105269, NCTC 12374

straininfo link

  • @ref: 76233
  • straininfo: 46882

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
15587Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21234)https://www.dsmz.de/collection/catalogue/details/culture/DSM-21234
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
39215Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/17270
56533Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 44895)https://www.ccug.se/strain?id=44895
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
76233Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID46882.1StrainInfo: A central database for resolving microbial strain identifiers
120645Curators of the CIPCollection of Institut Pasteur (CIP 105269 )https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20105269%20