Strain identifier
BacDive ID: 6739
Type strain:
Species: Legionella brunensis
Strain Designation: 441-1
Strain history: CIP <- 1993, C. Tram, Inst. Pasteur, Paris, France <- H.W. Wilkinson: strain 441-1 <- V. Drasar
NCBI tax ID(s): 29422 (species)
General
@ref: 7903
BacDive-ID: 6739
DSM-Number: 19236
keywords: genome sequence, 16S sequence, Bacteria, microaerophile, mesophilic, motile, human pathogen
description: Legionella brunensis 441-1 is a microaerophile, mesophilic, motile human pathogen that was isolated from water cooling tower.
NCBI tax id
- NCBI tax id: 29422
- Matching level: species
strain history
@ref | history |
---|---|
7903 | <- H. E. Müller <- ATCC <- H. W. Wilkinson; 441-1 <- V. Drasar |
117062 | CIP <- 1993, C. Tram, Inst. Pasteur, Paris, France <- H.W. Wilkinson: strain 441-1 <- V. Drasar |
doi: 10.13145/bacdive6739.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Legionellales
- family: Legionellaceae
- genus: Legionella
- species: Legionella brunensis
- full scientific name: Legionella brunensis Wilkinson et al. 1989
@ref: 7903
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Legionellales
family: Legionellaceae
genus: Legionella
species: Legionella brunensis
full scientific name: Legionella brunensis Wilkinson et al. 1989
strain designation: 441-1
type strain: yes
Morphology
cell morphology
@ref | motility | confidence | gram stain | cell shape |
---|---|---|---|---|
69480 | yes | 90.541 | ||
69480 | 99.996 | negative | ||
117062 | no | negative | rod-shaped |
colony morphology
- @ref: 7903
- incubation period: 3-7 days
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
7903 | BCYE-AGAR (DSMZ Medium 585) | yes | https://mediadive.dsmz.de/medium/585 | Name: BCYE AGAR (DSMZ Medium 585) Composition: OXOID Legionella CYE-Agar base |
40842 | MEDIUM 23 - for Afipia and Legionella | yes | Distilled water make up to (1000.000 ml);Legionella agar (37.000 g);Legionella - enrichment mixture (10.000 ml) | |
117062 | CIP Medium 23 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=23 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
7903 | positive | growth | 37 | mesophilic |
40842 | positive | growth | 37 | mesophilic |
50430 | positive | growth | 37 | mesophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
7903 | microaerophile |
50430 | microaerophile |
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | no | 100 |
69480 | no | 99.984 |
Isolation, sampling and environmental information
isolation
@ref | sample type | country | continent | geographic location | origin.country |
---|---|---|---|---|---|
7903 | water cooling tower | Czechoslovakia | Europe | ||
50430 | Water,cooling water tower | Czechoslovakia | Europe | Vyskov | |
117062 | Environment, Cooling tower water | Czech Republic | Europe | CZE |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Industrial | #Cooling tower |
#Environmental | #Aquatic |
taxonmaps
- @ref: 69479
- File name: preview.99_5629.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_35;96_1036;97_3328;98_4195;99_5629&stattab=map
- Last taxonomy: Legionella brunensis
- 16S sequence: NR_026520
- Sequence Identity:
- Total samples: 63
- soil counts: 30
- aquatic counts: 23
- animal counts: 9
- plant counts: 1
Safety information
risk assessment
@ref | pathogenicity human | biosafety level | biosafety level comment |
---|---|---|---|
7903 | yes, in single cases | 1 | Risk group (German classification) |
117062 | 2 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Legionella brunensis strain MDC1593 16S ribosomal RNA gene, partial sequence | JF720377 | 525 | ena | 29422 |
20218 | L.brunensis (441-1) gene for 16S ribosomal RNA | Z32636 | 1473 | ena | 29422 |
7903 | Legionella brunensis strain 441-1 16S ribosomal RNA, partial sequence | NR_026520 | 1473 | nuccore | 29422 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Legionella brunensis ATCC 43878 | GCA_001467025 | scaffold | ncbi | 29422 |
66792 | Legionella brunensis 441-1 | GCA_900639795 | scaffold | ncbi | 29422 |
66792 | Legionella brunensis strain ATCC 43878 | 29422.6 | wgs | patric | 29422 |
66792 | Legionella brunensis ATCC 43878 | 2690316045 | draft | img | 29422 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
flagellated | no | 77.238 | no |
gram-positive | no | 98.147 | no |
anaerobic | no | 97.641 | yes |
aerobic | no | 88.466 | yes |
halophile | no | 89.432 | no |
spore-forming | no | 92.929 | no |
glucose-util | yes | 66.229 | no |
motile | yes | 82.412 | no |
thermophile | no | 97.815 | yes |
glucose-ferment | no | 86.24 | no |
External links
@ref: 7903
culture collection no.: DSM 19236, ATCC 43878, CCUG 31114, CIP 103874, NCTC 12240
straininfo link
- @ref: 76209
- straininfo: 42101
literature
- topic: Phylogeny
- Pubmed-ID: 3179063
- title: Legionella moravica sp. nov. and Legionella brunensis sp. nov. isolated from cooling-tower water.
- authors: Wilkinson HW, Drasar V, Thacker WL, Benson RF, Schindler J, Potuznikova B, Mayberry WR, Brenner DJ
- journal: Ann Inst Pasteur Microbiol
- DOI: 10.1016/0769-2609(88)90102-0
- year: 1988
- mesh: Czechoslovakia, Legionella/analysis/classification/*isolation & purification, *Water Microbiology
- topic2: Enzymology
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
7903 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19236) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-19236 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
40842 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/15719 | ||||
50430 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 31114) | https://www.ccug.se/strain?id=31114 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
76209 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID42101.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
117062 | Curators of the CIP | Collection of Institut Pasteur (CIP 103874) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103874 |