Strain identifier

BacDive ID: 6709

Type strain: Yes

Species: Legionella gormanii

Strain Designation: LS-13 (ALLO3)

Culture col. no.: DSM 25296, ATCC 33342, CCUG 12267, CIP 104724, NCTC 11401

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 17988

BacDive-ID: 6709

DSM-Number: 25296

keywords: microaerophile, Bacteria, 16S sequence, genome sequence, mesophilic

description: Legionella gormanii LS-13 is a microaerophile, mesophilic bacterium that was isolated from soil.

strain history: <- H. E. Müller; ATCC 33342 <- ATCC <- A. Brown <- A. W. Pasculle <- CDC; LS-13 (ALLO3)

doi: 10.13145/bacdive6709.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Legionellales
  • family: Legionellaceae
  • genus: Legionella
  • species: Legionella gormanii
  • full scientific name: Legionella gormanii Morris et al. 1980
  • synonyms

    • @ref: 20215
    • synonym: Fluoribacter gormanii

@ref: 17988

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Legionellales

family: Legionellaceae

genus: Legionella

species: Legionella gormanii

full scientific name: Legionella gormanii Morris et al. 1980

strain designation: LS-13 (ALLO3)

type strain: yes

Morphology

colony morphology

  • @ref: 17988
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

  • @ref: 17988
  • name: BCYE-AGAR (DSMZ Medium 585), microaerophilic, needs high humidity
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium585.pdf

culture temp

  • @ref: 17988
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 17988
  • oxygen tolerance: microaerophile

enzymes

@refvalueactivityec
17988catalase+1.11.1.6
17988cytochrome-c oxidase-1.9.3.1

Isolation, sampling and environmental information

isolation

  • @ref: 17988
  • sample type: soil

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 17988
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Fluoribacter gormanii strain MDC1609 16S ribosomal RNA gene, partial sequenceJF720383522ena464
17988L.gormanii (LS-13) gene for 16S ribosomal RNAZ326391450ena464

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Fluoribacter gormanii NCTC11401GCA_900450965contigncbi464
66792Fluoribacter gormanii ATCC 33342GCA_900156395scaffoldncbi464
66792Fluoribacter gormanii strain ATCC 33342464.7wgspatric464
66792Fluoribacter gormanii strain NCTC11401464.13wgspatric464
66792Fluoribacter gormanii ATCC 333422681812897permanentimg464

External links

@ref: 17988

culture collection no.: DSM 25296, ATCC 33342, CCUG 12267, CIP 104724, NCTC 11401

straininfo link

@refpassport
20218http://www.straininfo.net/strains/109197
20218http://www.straininfo.net/strains/137948
20218http://www.straininfo.net/strains/151192
20218http://www.straininfo.net/strains/137949

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
17988Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25296)https://www.dsmz.de/collection/catalogue/details/culture/DSM-25296
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)