Strain identifier

BacDive ID: 6640

Type strain: No

Species: Loigolactobacillus rennini

Strain Designation: 1-17

Strain history: <- J. Stadhouders, 1-17

NCBI tax ID(s): 238013 (species)

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General

@ref: 8664

BacDive-ID: 6640

DSM-Number: 20254

keywords: 16S sequence, Bacteria, mesophilic

description: Loigolactobacillus rennini 1-17 is a mesophilic bacterium that was isolated from rennin.

NCBI tax id

  • NCBI tax id: 238013
  • Matching level: species

strain history

  • @ref: 8664
  • history: <- J. Stadhouders, 1-17

doi: 10.13145/bacdive6640.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Loigolactobacillus
  • species: Loigolactobacillus rennini
  • full scientific name: Loigolactobacillus rennini (Chenoll et al. 2006) Zheng et al. 2020
  • synonyms

    • @ref: 20215
    • synonym: Lactobacillus rennini

@ref: 8664

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Loigolactobacillus

species: Loigolactobacillus rennini

full scientific name: Loigolactobacillus rennini (Chenoll et al. 2006) Zheng et al. 2020

strain designation: 1-17

type strain: no

Culture and growth conditions

culture medium

  • @ref: 8664
  • name: AAM MEDIUM (DSMZ Medium 57)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/57
  • composition: Name: AAM MEDIUM (DSMZ Medium 57) Composition: Yeast extract 6.99301 g/l Casamino acids 6.99301 g/l Meat extract 4.99501 g/l Tryptone 4.99501 g/l Na-acetate 2.4975 g/l MgSO4 x 7 H2O 0.1998 g/l MnSO4 x H2O 0.04995 g/l Tween 80 Distilled water

culture temp

  • @ref: 8664
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

murein

  • @ref: 8664
  • murein short key: A11.31
  • type: A4alpha L-Lys-D-Asp

Isolation, sampling and environmental information

isolation

  • @ref: 8664
  • sample type: rennin

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Laboratory
  • Cat3: #Defined media

taxonmaps

  • @ref: 69479
  • File name: preview.99_7554.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_45;96_3525;97_4325;98_5537;99_7554&stattab=map
  • Last taxonomy: Loigolactobacillus rennini subclade
  • 16S sequence: AJ576008
  • Sequence Identity:
  • Total samples: 3993
  • soil counts: 301
  • aquatic counts: 361
  • animal counts: 3183
  • plant counts: 148

Safety information

risk assessment

  • @ref: 8664
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Lactobacillus sp. CECT 5923 16S rRNA gene, strain CECT 5923
  • accession: AJ576008
  • length: 1544
  • database: ena
  • NCBI tax ID: 238013

External links

@ref: 8664

culture collection no.: DSM 20254, CECT 5923

straininfo link

  • @ref: 76114
  • straininfo: 49595

literature

  • topic: Phylogeny
  • Pubmed-ID: 16449456
  • title: Lactobacillus rennini sp. nov., isolated from rennin and associated with cheese spoilage.
  • authors: Chenoll E, Macian MC, Aznar R
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.64021-0
  • year: 2006
  • mesh: Bacterial Typing Techniques, Base Sequence, Cheese/*microbiology, Chymosin/*metabolism, Fermentation, Genes, rRNA, Genotype, Lactobacillus/*classification/*genetics/isolation & purification/physiology, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8664Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20254)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20254
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
76114Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49595.1StrainInfo: A central database for resolving microbial strain identifiers