Strain identifier
BacDive ID: 6640
Type strain:
Species: Loigolactobacillus rennini
Strain Designation: 1-17
Strain history: <- J. Stadhouders, 1-17
NCBI tax ID(s): 238013 (species)
version 8.1 (current version)
General
@ref: 8664
BacDive-ID: 6640
DSM-Number: 20254
keywords: 16S sequence, Bacteria, mesophilic
description: Loigolactobacillus rennini 1-17 is a mesophilic bacterium that was isolated from rennin.
NCBI tax id
- NCBI tax id: 238013
- Matching level: species
strain history
- @ref: 8664
- history: <- J. Stadhouders, 1-17
doi: 10.13145/bacdive6640.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Loigolactobacillus
- species: Loigolactobacillus rennini
- full scientific name: Loigolactobacillus rennini (Chenoll et al. 2006) Zheng et al. 2020
synonyms
- @ref: 20215
- synonym: Lactobacillus rennini
@ref: 8664
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Loigolactobacillus
species: Loigolactobacillus rennini
full scientific name: Loigolactobacillus rennini (Chenoll et al. 2006) Zheng et al. 2020
strain designation: 1-17
type strain: no
Culture and growth conditions
culture medium
- @ref: 8664
- name: AAM MEDIUM (DSMZ Medium 57)
- growth: yes
- link: https://mediadive.dsmz.de/medium/57
- composition: Name: AAM MEDIUM (DSMZ Medium 57) Composition: Yeast extract 6.99301 g/l Casamino acids 6.99301 g/l Meat extract 4.99501 g/l Tryptone 4.99501 g/l Na-acetate 2.4975 g/l MgSO4 x 7 H2O 0.1998 g/l MnSO4 x H2O 0.04995 g/l Tween 80 Distilled water
culture temp
- @ref: 8664
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
murein
- @ref: 8664
- murein short key: A11.31
- type: A4alpha L-Lys-D-Asp
Isolation, sampling and environmental information
isolation
- @ref: 8664
- sample type: rennin
isolation source categories
- Cat1: #Engineered
- Cat2: #Laboratory
- Cat3: #Defined media
taxonmaps
- @ref: 69479
- File name: preview.99_7554.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_45;96_3525;97_4325;98_5537;99_7554&stattab=map
- Last taxonomy: Loigolactobacillus rennini subclade
- 16S sequence: AJ576008
- Sequence Identity:
- Total samples: 3993
- soil counts: 301
- aquatic counts: 361
- animal counts: 3183
- plant counts: 148
Safety information
risk assessment
- @ref: 8664
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Lactobacillus sp. CECT 5923 16S rRNA gene, strain CECT 5923
- accession: AJ576008
- length: 1544
- database: ena
- NCBI tax ID: 238013
External links
@ref: 8664
culture collection no.: DSM 20254, CECT 5923
straininfo link
- @ref: 76114
- straininfo: 49595
literature
- topic: Phylogeny
- Pubmed-ID: 16449456
- title: Lactobacillus rennini sp. nov., isolated from rennin and associated with cheese spoilage.
- authors: Chenoll E, Macian MC, Aznar R
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.64021-0
- year: 2006
- mesh: Bacterial Typing Techniques, Base Sequence, Cheese/*microbiology, Chymosin/*metabolism, Fermentation, Genes, rRNA, Genotype, Lactobacillus/*classification/*genetics/isolation & purification/physiology, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics
- topic2: Genetics
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
8664 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20254) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-20254 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
76114 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49595.1 | StrainInfo: A central database for resolving microbial strain identifiers |