Strain identifier

BacDive ID: 6551

Type strain: No

Species: Lacticaseibacillus paracasei subsp. paracasei

Strain Designation: 85 E

Strain history: T. Mitsuoka S8-6 <-- DSM 20006 <-- F. Eschenbecher 85E ("Lactobacillus casei subsp. fusiformis").

NCBI tax ID(s): 47714 (subspecies)

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General

@ref: 8421

BacDive-ID: 6551

DSM-Number: 20006

keywords: Bacteria, mesophilic, human pathogen

description: Lacticaseibacillus paracasei subsp. paracasei 85 E is a mesophilic human pathogen that was isolated from beer.

NCBI tax id

  • NCBI tax id: 47714
  • Matching level: subspecies

strain history

@refhistory
8421<- F. Eschenbecher, 85 E (Lactobacillus casei subsp. fusiformis)
67770T. Mitsuoka S8-6 <-- DSM 20006 <-- F. Eschenbecher 85E ("Lactobacillus casei subsp. fusiformis").

doi: 10.13145/bacdive6551.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Lacticaseibacillus
  • species: Lacticaseibacillus paracasei subsp. paracasei
  • full scientific name: Lacticaseibacillus paracasei subsp. paracasei (Collins et al. 1989) Zheng et al. 2020

  • synonyms

    • @ref: 20215
    • synonym: Lactobacillus paracasei subsp. paracasei

@ref: 8421

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Lacticaseibacillus

species: Lacticaseibacillus paracasei subsp. paracasei

full scientific name: Lacticaseibacillus paracasei subsp. paracasei (Collins et al. 1989) Zheng et al. 2020

strain designation: 85 E

type strain: no

Culture and growth conditions

culture medium

  • @ref: 8421
  • name: MRS MEDIUM (DSMZ Medium 11)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/11
  • composition: Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
8421positivegrowth30mesophilic
67770positivegrowth30mesophilic

Physiology and metabolism

murein

  • @ref: 8421
  • murein short key: A11.31
  • type: A4alpha L-Lys-D-Asp

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate+builds acid from24265
68371L-arabitol+builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose+builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose+builds acid from32528
68371gentiobiose+builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose+builds acid from6731
68371inulin-builds acid from15443
68371trehalose+builds acid from27082
68371sucrose+builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371maltose+builds acid from17306
68371cellobiose+builds acid from17057
68371salicin+builds acid from17814
68371esculin+builds acid from4853
68371arbutin+builds acid from18305
68371amygdalin+builds acid from27613
68371N-acetylglucosamine+builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol+builds acid from17924
68371D-mannitol+builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose+builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose+builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754

API 50CHac

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
8421-----+----++++----++--+++++++--++-+----++-+---++--

Isolation, sampling and environmental information

isolation

@refsample type
8421beer
67770Beer

isolation source categories

Cat1Cat2Cat3
#Engineered#Food production#Beverage
#Engineered#Food production#Fermented
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Fruit (Seed)

Safety information

risk assessment

  • @ref: 8421
  • pathogenicity human: yes, in single cases
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

External links

@ref: 8421

culture collection no.: DSM 20006, JCM 1163, KCTC 3166

straininfo link

  • @ref: 76022
  • straininfo: 49560

literature

  • topic: Metabolism
  • Pubmed-ID: 26966939
  • title: A Lactobacillus mutant capable of accumulating long-chain polyphosphates that enhance intestinal barrier function.
  • authors: Saiki A, Ishida Y, Segawa S, Hirota R, Nakamura T, Kuroda A
  • journal: Biosci Biotechnol Biochem
  • DOI: 10.1080/09168451.2015.1135041
  • year: 2016
  • mesh: Ammonium Chloride/antagonists & inhibitors/pharmacology, Animals, Biological Transport/drug effects, Intestine, Small/*drug effects/metabolism, Lactobacillus paracasei/drug effects/*genetics/metabolism, Male, Mannitol/metabolism, Mice, Mice, Inbred C57BL, *Mutagenesis, Mutagens/pharmacology, Nitrosoguanidines/pharmacology, Oxidants/antagonists & inhibitors/pharmacology, Permeability/drug effects, Polyphosphates/metabolism/*pharmacology, Probiotics/metabolism/*pharmacology, Selection, Genetic, Tissue Culture Techniques
  • topic2: Pathogenicity

Reference

@idauthorscataloguedoi/urltitle
8421Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20006)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20006
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68371Automatically annotated from API 50CH acid
76022Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49560.1StrainInfo: A central database for resolving microbial strain identifiers