Strain identifier
BacDive ID: 6520
Type strain:
Species: Fructilactobacillus sanfranciscensis
Strain Designation: 242-2
Strain history: CIP <- 1987, DSM <- G. Spicher: strain 242-2, Lactobacillus brevis subsp. lindneri
NCBI tax ID(s): 1625 (species)
General
@ref: 8883
BacDive-ID: 6520
DSM-Number: 20663
keywords: 16S sequence, Bacteria, mesophilic
description: Fructilactobacillus sanfranciscensis 242-2 is a mesophilic bacterium that was isolated from sourdough.
NCBI tax id
- NCBI tax id: 1625
- Matching level: species
strain history
@ref | history |
---|---|
8883 | <- G. Spicher, 242-2 (Lactobacillus brevis var. lindneri) |
67770 | CIP 102982 <-- DSM 20663 <-- G. Spicher 242-2. |
122416 | CIP <- 1987, DSM <- G. Spicher: strain 242-2, Lactobacillus brevis subsp. lindneri |
doi: 10.13145/bacdive6520.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Fructilactobacillus
- species: Fructilactobacillus sanfranciscensis
- full scientific name: Fructilactobacillus sanfranciscensis (Weiss and Schillinger 1984 ex Kline and Sugihara 1971) Zheng et al. 2020
synonyms
@ref synonym 20215 Lactobacillus sanfrancisco 20215 Lactobacillus sanfranciscensis
@ref: 8883
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Fructilactobacillus
species: Fructilactobacillus sanfranciscensis
full scientific name: Fructilactobacillus sanfranciscensis (Weiss and Schillinger 1984) Zheng et al. 2020
strain designation: 242-2
type strain: no
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
8883 | SOUR DOUGH MEDIUM (DSMZ Medium 225) | yes | https://mediadive.dsmz.de/medium/225 | Name: SOUR DOUGH MEDIUM (DSMZ Medium 225) Composition: Maltose 20.0 g/l Casein peptone 6.0 g/l Tween 80 0.3 g/l Yeast extract Distilled water |
40498 | MEDIUM 50 - for Lactobacillus sanfranciscensis | yes | Distilled water make up to (1000.000 ml);Maltose (10.000 g);Man Rogosa Sharp broth (55.000 g);Cysteine hydrochloride 5 % solution - M0172 (100.000 ml) | |
122416 | CIP Medium 41 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=41 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
8883 | positive | growth | 28 | mesophilic |
40498 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
Physiology and metabolism
murein
- @ref: 8883
- murein short key: A11.04
- type: A3alpha L-Lys-L-Ala
metabolite utilization
@ref | metabolite | utilization activity | kind of utilization tested | Chebi-ID |
---|---|---|---|---|
68371 | Potassium 5-ketogluconate | - | builds acid from | |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | L-arabitol | - | builds acid from | 18403 |
68371 | D-arabitol | - | builds acid from | 18333 |
68371 | L-fucose | - | builds acid from | 18287 |
68371 | D-fucose | - | builds acid from | 28847 |
68371 | D-tagatose | - | builds acid from | 16443 |
68371 | D-lyxose | - | builds acid from | 62318 |
68371 | turanose | - | builds acid from | 32528 |
68371 | gentiobiose | - | builds acid from | 28066 |
68371 | xylitol | - | builds acid from | 17151 |
68371 | glycogen | - | builds acid from | 28087 |
68371 | starch | - | builds acid from | 28017 |
68371 | raffinose | - | builds acid from | 16634 |
68371 | melezitose | - | builds acid from | 6731 |
68371 | inulin | - | builds acid from | 15443 |
68371 | trehalose | - | builds acid from | 27082 |
68371 | sucrose | - | builds acid from | 17992 |
68371 | melibiose | - | builds acid from | 28053 |
68371 | lactose | - | builds acid from | 17716 |
68371 | cellobiose | - | builds acid from | 17057 |
68371 | salicin | - | builds acid from | 17814 |
68371 | esculin | - | builds acid from | 4853 |
68371 | arbutin | - | builds acid from | 18305 |
68371 | amygdalin | - | builds acid from | 27613 |
68371 | N-acetylglucosamine | - | builds acid from | 59640 |
68371 | methyl alpha-D-glucopyranoside | - | builds acid from | 320061 |
68371 | methyl alpha-D-mannoside | - | builds acid from | 43943 |
68371 | D-sorbitol | - | builds acid from | 17924 |
68371 | D-mannitol | - | builds acid from | 16899 |
68371 | myo-inositol | - | builds acid from | 17268 |
68371 | galactitol | - | builds acid from | 16813 |
68371 | L-rhamnose | - | builds acid from | 62345 |
68371 | L-sorbose | - | builds acid from | 17266 |
68371 | D-mannose | - | builds acid from | 16024 |
68371 | D-fructose | - | builds acid from | 15824 |
68371 | D-galactose | - | builds acid from | 12936 |
68371 | methyl beta-D-xylopyranoside | - | builds acid from | 74863 |
68371 | ribitol | - | builds acid from | 15963 |
68371 | L-xylose | - | builds acid from | 65328 |
68371 | D-xylose | - | builds acid from | 65327 |
68371 | D-ribose | - | builds acid from | 16988 |
68371 | L-arabinose | - | builds acid from | 30849 |
68371 | D-arabinose | - | builds acid from | 17108 |
68371 | erythritol | - | builds acid from | 17113 |
68371 | glycerol | - | builds acid from | 17754 |
API 50CHac
@ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8883 | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - |
122416 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type |
---|---|
8883 | sourdough |
67770 | Sourdough |
122416 | Food, Sour dough |
isolation source categories
- Cat1: #Engineered
- Cat2: #Food production
- Cat3: #Fermented
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
8883 | 1 | Risk group (German classification) |
122416 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Lactobacillus sanfranciscensis strain ATCC 43332 16S ribosomal RNA gene, partial sequence; large 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence | AY459583 | 807 | ena | 1625 |
20218 | Lactobacillus sanfranciscensis strain ATCC 43332 16S ribosomal RNA gene, partial sequence; medium 16S-23S ribosomal RNA intergenic spacer and tRNA-OTHER gene, complete sequence; and 23S ribosomal RNA gene, partial sequence | AY459584 | 678 | ena | 1625 |
20218 | Lactobacillus sanfranciscensis strain ATCC 43332 16S ribosomal RNA gene, partial sequence; small 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | AY459585 | 542 | ena | 1625 |
8883 | L.sanfrancisco (DSM 20663) 16S rRNA gene | X76331 | 1572 | ena | 1625 |
GC content
- @ref: 8883
- GC-content: 37.0
External links
@ref: 8883
culture collection no.: DSM 20663, ATCC 43332, JCM 11032, CIP 102982
straininfo link
- @ref: 75992
- straininfo: 45127
literature
- topic: Metabolism
- Pubmed-ID: 27541979
- title: Unconventional bacterial association for dough leavening.
- authors: Musatti A, Mapelli C, Foschino R, Picozzi C, Rollini M
- journal: Int J Food Microbiol
- DOI: 10.1016/j.ijfoodmicro.2016.08.011
- year: 2016
- mesh: Bread/analysis/microbiology, Ethanol/metabolism, Fermentation, Food Microbiology, Fructose/metabolism, Glucose/metabolism, Hydrolysis, Lactobacillus/growth & development/*metabolism, Microbiota, Sucrose/metabolism, Triticum/microbiology, Zymomonas/growth & development/*metabolism
- topic2: Biotechnology
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
8883 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20663) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-20663 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
40498 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/14728 | ||||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68371 | Automatically annotated from API 50CH acid | |||||
75992 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID45127.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
122416 | Curators of the CIP | Collection of Institut Pasteur (CIP 102982) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102982 |