Strain identifier

BacDive ID: 6514

Type strain: No

Species: Latilactobacillus sakei subsp. sakei

Strain Designation: S

Strain history: <- ATCC <- G. Malyoth, S

NCBI tax ID(s): 214326 (subspecies)

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General

@ref: 8526

BacDive-ID: 6514

DSM-Number: 20100

keywords: 16S sequence, Bacteria, mesophilic

description: Latilactobacillus sakei subsp. sakei S is a mesophilic bacterium that was isolated from stool of breast-fed infant.

NCBI tax id

  • NCBI tax id: 214326
  • Matching level: subspecies

strain history

  • @ref: 8526
  • history: <- ATCC <- G. Malyoth, S

doi: 10.13145/bacdive6514.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Latilactobacillus
  • species: Latilactobacillus sakei subsp. sakei
  • full scientific name: Latilactobacillus sakei subsp. sakei (Katagiri et al. 1934) Zheng et al. 2020
  • synonyms

    @refsynonym
    20215Lactobacillus sakei subsp. sakei
    20215Lactobacillus sake subsp. sake

@ref: 8526

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Latilactobacillus

species: Latilactobacillus sakei subsp. sakei

full scientific name: Latilactobacillus sakei subsp. sakei (Katagiri et al. 1934) Zheng et al. 2020

strain designation: S

type strain: no

Culture and growth conditions

culture medium

  • @ref: 8526
  • name: MRS MEDIUM (DSMZ Medium 11)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/11
  • composition: Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

culture temp

  • @ref: 8526
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

murein

  • @ref: 8526
  • murein short key: A11.31
  • type: A4alpha L-Lys-D-Asp

Isolation, sampling and environmental information

isolation

  • @ref: 8526
  • sample type: stool of breast-fed infant

isolation source categories

Cat1Cat2Cat3
#Host#Human#Child
#Host Body Product#Gastrointestinal tract#Feces (Stool)

Safety information

risk assessment

  • @ref: 8526
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Bifidobacterium adolescentis ATCC11146 16S-23S intergenic spacer
  • accession: U09511
  • length: 274
  • database: ena
  • NCBI tax ID: 1680

GC content

  • @ref: 8526
  • GC-content: 43
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 8526

culture collection no.: DSM 20100, ATCC 11146

straininfo link

  • @ref: 75986
  • straininfo: 35332

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8526Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20100)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20100
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
75986Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID35332.1StrainInfo: A central database for resolving microbial strain identifiers