Strain identifier
BacDive ID: 6466
Type strain:
Species: Lactobacillus gasseri
Strain Designation: AM 63
Strain history: CIP <- 1987, DSMZ <- O. Kandler <- F. Gasser: strain AM 63
NCBI tax ID(s): 324831 (strain), 1596 (species)
General
@ref: 8654
BacDive-ID: 6466
DSM-Number: 20243
keywords: genome sequence, 16S sequence, Bacteria, anaerobe, mesophilic, human pathogen
description: Lactobacillus gasseri AM 63 is an anaerobe, mesophilic human pathogen that was isolated from human.
NCBI tax id
NCBI tax id | Matching level |
---|---|
324831 | strain |
1596 | species |
strain history
@ref | history |
---|---|
8654 | <- F. Gasser, AM 63 (Lactobacillus acidophilus) |
67770 | DSM 20243 <-- F. Gasser AM63 (Lactobacillus acidophilus). |
119540 | CIP <- 1987, DSMZ <- O. Kandler <- F. Gasser: strain AM 63 |
doi: 10.13145/bacdive6466.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Lactobacillus
- species: Lactobacillus gasseri
- full scientific name: Lactobacillus gasseri Lauer and Kandler 1980
@ref: 8654
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Lactobacillus
species: Lactobacillus gasseri
full scientific name: Lactobacillus gasseri Lauer and Kandler 1980
strain designation: AM 63
type strain: yes
Morphology
cell morphology
@ref | motility | confidence | gram stain | cell shape |
---|---|---|---|---|
69480 | no | 92.743 | ||
69480 | 100 | positive | ||
119540 | no | positive | rod-shaped |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
8654 | MRS MEDIUM WITH CYSTEINE (DSMZ Medium 232) | yes | https://mediadive.dsmz.de/medium/232 | Name: MRS MEDIUM WITH CYSTEINE (DSMZ Medium 232) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)2 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water |
40500 | MEDIUM 40- for Lactobacillus and Leuconostoc | yes | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |
119540 | CIP Medium 40 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=40 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
8654 | positive | growth | 37 | mesophilic |
40500 | positive | growth | 37 | mesophilic |
50606 | positive | growth | 37 | mesophilic |
67770 | positive | growth | 37 | mesophilic |
119540 | positive | growth | 37-45 | |
119540 | no | growth | 15 | psychrophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
8654 | anaerobe |
50606 | microaerophile |
119540 | facultative anaerobe |
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | no | 100 |
69480 | no | 99.954 |
murein
- @ref: 8654
- murein short key: A11.31
- type: A4alpha L-Lys-D-Asp
metabolite utilization
@ref | metabolite | utilization activity | kind of utilization tested | Chebi-ID |
---|---|---|---|---|
68371 | Potassium 5-ketogluconate | - | builds acid from | |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | gluconate | - | builds acid from | 24265 |
68371 | L-arabitol | - | builds acid from | 18403 |
68371 | D-arabitol | - | builds acid from | 18333 |
68371 | L-fucose | - | builds acid from | 18287 |
68371 | D-fucose | - | builds acid from | 28847 |
68371 | D-tagatose | + | builds acid from | 16443 |
68371 | D-lyxose | - | builds acid from | 62318 |
68371 | turanose | - | builds acid from | 32528 |
68371 | xylitol | - | builds acid from | 17151 |
68371 | glycogen | - | builds acid from | 28087 |
68371 | raffinose | - | builds acid from | 16634 |
68371 | melezitose | - | builds acid from | 6731 |
68371 | inulin | - | builds acid from | 15443 |
68371 | trehalose | + | builds acid from | 27082 |
68371 | sucrose | + | builds acid from | 17992 |
68371 | melibiose | - | builds acid from | 28053 |
68371 | lactose | + | builds acid from | 17716 |
68371 | maltose | + | builds acid from | 17306 |
68371 | cellobiose | + | builds acid from | 17057 |
68371 | salicin | + | builds acid from | 17814 |
68371 | esculin | + | builds acid from | 4853 |
68371 | arbutin | + | builds acid from | 18305 |
68371 | amygdalin | + | builds acid from | 27613 |
68371 | N-acetylglucosamine | + | builds acid from | 59640 |
68371 | methyl alpha-D-glucopyranoside | - | builds acid from | 320061 |
68371 | methyl alpha-D-mannoside | - | builds acid from | 43943 |
68371 | D-sorbitol | - | builds acid from | 17924 |
68371 | D-mannitol | - | builds acid from | 16899 |
68371 | myo-inositol | - | builds acid from | 17268 |
68371 | galactitol | - | builds acid from | 16813 |
68371 | L-rhamnose | - | builds acid from | 62345 |
68371 | L-sorbose | - | builds acid from | 17266 |
68371 | D-mannose | + | builds acid from | 16024 |
68371 | D-fructose | + | builds acid from | 15824 |
68371 | D-glucose | + | builds acid from | 17634 |
68371 | D-galactose | + | builds acid from | 12936 |
68371 | methyl beta-D-xylopyranoside | - | builds acid from | 74863 |
68371 | ribitol | - | builds acid from | 15963 |
68371 | L-xylose | - | builds acid from | 65328 |
68371 | D-xylose | - | builds acid from | 65327 |
68371 | D-ribose | - | builds acid from | 16988 |
68371 | L-arabinose | - | builds acid from | 30849 |
68371 | D-arabinose | - | builds acid from | 17108 |
68371 | erythritol | - | builds acid from | 17113 |
68371 | glycerol | - | builds acid from | 17754 |
119540 | nitrate | - | reduction | 17632 |
119540 | nitrite | - | reduction | 16301 |
119540 | nitrate | + | respiration | 17632 |
metabolite tests
- @ref: 119540
- Chebi-ID: 15688
- metabolite: acetoin
- voges-proskauer-test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68382 | alpha-fucosidase | - | 3.2.1.51 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 |
68382 | beta-glucosidase | + | 3.2.1.21 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | acid phosphatase | - | 3.1.3.2 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | trypsin | - | 3.4.21.4 |
68382 | cystine arylamidase | - | 3.4.11.3 |
68382 | valine arylamidase | - | |
68382 | leucine arylamidase | - | 3.4.11.1 |
68382 | lipase (C 14) | - | |
68382 | esterase lipase (C 8) | - | |
68382 | esterase (C 4) | - | |
68382 | alkaline phosphatase | - | 3.1.3.1 |
119540 | oxidase | - | |
119540 | alcohol dehydrogenase | - | 1.1.1.1 |
119540 | catalase | - | 1.11.1.6 |
119540 | lysine decarboxylase | - | 4.1.1.18 |
119540 | ornithine decarboxylase | - | 4.1.1.17 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
119540 | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | + | + | - | - |
API 50CHac
@ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8654 | - | - | - | - | - | - | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | + | + | + | + | + | + | + | - | + | + | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - |
8654 | - | - | - | - | - | - | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | + | + | + | + | + | + | + | - | + | + | - | - | - | + | - | - | + | - | - | + | - | - | - | - | - | - | - |
8654 | - | - | - | - | - | - | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | + | + | + | + | + | + | + | - | + | + | - | - | - | + | - | - | + | - | - | + | - | - | - | - | - | - | - |
8654 | - | - | - | - | - | - | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | + | + | + | + | + | + | + | - | + | + | - | - | - | + | - | - | + | - | - | + | - | - | - | - | - | - | - |
119540 | - | - | - | - | - | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | + | + | + | + | + | + | + | - | + | + | - | - | - | +/- | - | - | + | - | - | + | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type |
---|---|
8654 | human |
67770 | Human intestine |
119540 | Human, Vaginal tract |
isolation source categories
- Cat1: #Host
- Cat2: #Human
taxonmaps
- @ref: 69479
- File name: preview.99_840.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_46;96_506;97_581;98_668;99_840&stattab=map
- Last taxonomy: Lactobacillus
- 16S sequence: AF519171
- Sequence Identity:
- Total samples: 185237
- soil counts: 4782
- aquatic counts: 5652
- animal counts: 173268
- plant counts: 1535
Safety information
risk assessment
@ref | pathogenicity human | biosafety level | biosafety level comment |
---|---|---|---|
8654 | yes, in single cases | 1 | Risk group (German classification) |
119540 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Lactobacillus gasseri 16S-23S rRNA intergenic spacer region | AF074859 | 216 | ena | 324831 |
20218 | Lactobacillus gasseri strain ATCC 33323 16S ribosomal RNA gene, complete sequence | AF519171 | 1747 | ena | 324831 |
20218 | Lactobacillus gasseri partial 16S rRNA gene, type strain CIP 102991T | HE573914 | 1529 | ena | 1596 |
20218 | Lactobacillus gasseri gene for 16S rRNA, partial sequence, strain: YIT 0192 (= DSM 20243) | AB008209 | 1566 | ena | 1596 |
20218 | Lactobacillus gasseri strain DSM 20243 16S ribosomal RNA gene, partial sequence | EF468096 | 395 | ena | 324831 |
20218 | Lactobacillus gasseri 16S ribosomal RNA | M58820 | 1521 | ena | 1596 |
20218 | Lactobacillus gasseri gene for 16S rRNA, partial sequence, strain: JCM 1131 | AB289134 | 676 | ena | 1596 |
20218 | L.gasseri 16S rRNA gene | X61137 | 1350 | ena | 324831 |
67770 | Lactobacillus gasseri gene for 16S ribosomal RNA, partial sequence, strain: JCM 1131 | LC064892 | 1508 | ena | 1596 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Lactobacillus gasseri ATCC 33323 = JCM 1131 | GCA_000014425 | complete | ncbi | 324831 |
66792 | Lactobacillus gasseri ATCC 33323 | 324831.13 | complete | patric | 324831 |
66792 | Lactobacillus gasseri ATCC 33323 = JCM 1131 | 324831.46 | wgs | patric | 324831 |
66792 | Lactobacillus gasseri JCM 1131 | 1236546.3 | wgs | patric | 324831 |
66792 | Lactobacillus gasseri strain NCTC13722 | 1596.110 | wgs | patric | 1596 |
66792 | Lactobacillus gasseri JCM 1131 | 2585427878 | draft | img | 324831 |
66792 | Lactobacillus gasseri ATCC 33323 | 639633030 | complete | img | 324831 |
67770 | Lactobacillus gasseri ATCC 33323 = JCM 1131 | GCA_000615125 | contig | ncbi | 324831 |
67770 | Lactobacillus gasseri NCTC13722 | GCA_900452355 | contig | ncbi | 1596 |
67770 | Lactobacillus gasseri ATCC 33323 = JCM 1131 | GCA_008868295 | contig | ncbi | 324831 |
66792 | Lactobacillus gasseri ATCC 33323 = JCM 1131 DSM 20243 | GCA_029823575 | contig | ncbi | 324831 |
GC content
@ref | GC-content | method |
---|---|---|
8654 | 34.0 | |
67770 | 34 | |
67770 | 35.3 | genome sequence analysis |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
motile | no | 96.116 | no |
flagellated | no | 97.869 | no |
gram-positive | yes | 96.105 | no |
anaerobic | no | 58.481 | no |
halophile | yes | 87.754 | no |
spore-forming | no | 96.276 | no |
thermophile | no | 99.469 | no |
glucose-util | yes | 92.803 | no |
aerobic | no | 97.843 | yes |
glucose-ferment | yes | 91.077 | no |
External links
@ref: 8654
culture collection no.: CCUG 31451, DSM 20243, ATCC 33323, NCDO 2233, NCIB 11718, JCM 1131, BCC 49728, BCRC 14619, CCM 7009, CECT 4479, CGMCC 1.3396, CIP 102991, KCTC 3163, LMG 9203, NCFB 2233, NCIMB 11718, NCTC 13722, NRIC 1546, NRRL B-14168, NRRL B-4240, VTT E-991245, PCM 2500
straininfo link
@ref | straininfo |
---|---|
75938 | 7309 |
75939 | 312265 |
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Enzymology | 8071209 | Isolation of a novel IS3 group insertion element and construction of an integration vector for Lactobacillus spp. | Walker DC, Klaenhammer TR | J Bacteriol | 10.1128/jb.176.17.5330-5340.1994 | 1994 | Amino Acid Sequence, Bacterial Proteins/biosynthesis/chemistry, Base Sequence, Blotting, Southern, Chromosomes, Bacterial/chemistry, Cloning, Molecular, Conjugation, Genetic, *DNA Transposable Elements, DNA, Bacterial/chemistry/*genetics/isolation & purification, Electroporation, Escherichia coli, Escherichia coli Proteins, Genetic Vectors, Lactobacillus/*genetics, Molecular Sequence Data, *Nucleic Acid Conformation, Plasmids/isolation & purification/metabolism, Restriction Mapping, Sequence Homology, Amino Acid | Phylogeny |
Metabolism | 8076807 | Expression of mRNA encoding IFN alpha in macrophages stimulated with Lactobacillus gasseri. | Kitazawa H, Tomioka Y, Matsumura K, Aso H, Mizugaki M, Itoh T, Yamaguchi T | FEMS Microbiol Lett | 10.1111/j.1574-6968.1994.tb07052.x | 1994 | Animals, Base Sequence, Cells, Cultured, DNA Primers, Interferon-alpha/biosynthesis/*genetics, Lactobacillus/*immunology, Macrophages/*immunology/metabolism, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Molecular Sequence Data, Peyer's Patches/cytology, RNA, Messenger/*genetics/metabolism, Spleen/cytology | Genetics |
Enzymology | 10857549 | UV-induced Lactobacillus gasseri mutants resisting sodium chloride and sodium nitrite for meat fermentation. | Arihara K, Itoh M | Int J Food Microbiol | 10.1016/s0168-1605(99)00206-8 | 2000 | Animals, Electrophoresis, Polyacrylamide Gel, Fermentation, Humans, Lactobacillus/genetics/*radiation effects, Meat Products/*microbiology, Mutation, Sodium Chloride/*pharmacology, Sodium Nitrite/*pharmacology, Swine, Ultraviolet Rays | Pathogenicity |
Metabolism | 11393684 | AT oligonucleotides inducing B lymphocyte activation exist in probiotic Lactobacillus gasseri. | Kitazawa H, Ueha S, Itoh S, Watanabe H, Konno K, Kawai Y, Saito T, Itoh T, Yamaguchi T | Int J Food Microbiol | 10.1016/s0168-1605(00)00500-6 | 2001 | Animals, B-Lymphocytes/cytology/*immunology/metabolism, Base Sequence, DNA, Bacterial/analysis/chemistry, Gene Amplification, *Lactobacillus/genetics/immunology, *Lymphocyte Activation, Male, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Molecular Sequence Data, Oligonucleotides/genetics/metabolism/*pharmacology, Polymerase Chain Reaction, *Probiotics, Sequence Homology, Nucleic Acid, Specific Pathogen-Free Organisms | Genetics |
Pathogenicity | 12076036 | A novel immunostimulating aspect of Lactobacillus gasseri: induction of "Gasserokine" as chemoattractants for macrophages. | Kitazawa H, Ino T, Kawai Y, Itoh T, Saito T | Int J Food Microbiol | 10.1016/s0168-1605(02)00045-4 | 2002 | Animals, Chemotactic Factors/analysis/*isolation & purification, Chromatography, High Pressure Liquid, Chromatography, Ion Exchange, Humans, Lactobacillus/*immunology, Lactobacillus acidophilus/immunology, Macrophages/*immunology, Male, Mice, Mice, Inbred C57BL, Monocytes/immunology, Probiotics, Specific Pathogen-Free Organisms | Enzymology |
Enzymology | 12373759 | Pulsed-field gel electrophoretic analysis of the genome of Lactobacillus gasseri ATCC33323, and construction of a physical map. | Abs El-Osta YG, Hillier AJ, Davidson BE, Dobos M | Electrophoresis | 10.1002/1522-2683(200210)23:19<3321::AID-ELPS3321>3.0.CO;2-G | 2002 | DNA Restriction Enzymes/metabolism, Electrophoresis, Gel, Pulsed-Field/*methods, Genetic Linkage, *Genome, Bacterial, Lactobacillus/*genetics, Molecular Weight, Operon/genetics, Physical Chromosome Mapping/*methods, Replication Origin/genetics | Genetics |
Enzymology | 15454317 | Characterization of lytic enzyme activities of Lactobacillus gasseri with special reference to autolysis. | Yokoi KJ, Kawasaki K, Taketo A, Kodaira K | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2004.03.021 | 2004 | Bacteriolysis/drug effects/*physiology, Culture Media, Dose-Response Relationship, Drug, Hydrogen-Ion Concentration, Lactobacillus/drug effects/*enzymology/radiation effects, Molecular Weight, Probiotics, Sodium Chloride/*pharmacology, Ultraviolet Rays | Pathogenicity |
Enzymology | 15533265 | Lactobacillus gasseri: effects on mouse intestinal flora enzyme activity and isoflavonoids in the caecum and plasma. | Tamura M, Ohnishi-Kameyama M, Shinohara K | Br J Nutr | 10.1079/bjn20041267 | 2004 | Animals, Body Weight/physiology, Cecum/enzymology/metabolism/*microbiology, Colony Count, Microbial/methods, Eating/physiology, Equol, Isoflavones/*analysis/blood, Lactobacillus/*physiology, Male, Mice, Mice, Inbred ICR, Phytoestrogens/blood | Metabolism |
Enzymology | 15808364 | Molecular properties of the two-component cell lysis system encoded by prophage phigaY of Lactobacillus gasseri JCM 1131T: cloning, sequencing, and expression in Escherichia coli. | Yokoi KJ, Shinohara M, Kawahigashi N, Nakagawa K, Kawasaki K, Nakamura S, Taketo A, Kodaira K | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2004.08.021 | 2005 | Amino Acid Sequence, Bacterial Proteins/analysis/genetics, Bacteriophages/physiology, Base Sequence, Cloning, Molecular, DNA, Bacterial/*analysis, Escherichia coli/genetics, Fermentation, Gene Expression Regulation, Bacterial, Gene Expression Regulation, Enzymologic, Lactobacillus/*enzymology/genetics/virology, Lysogeny/*genetics, Molecular Sequence Data, N-Acetylmuramoyl-L-alanine Amidase/*genetics/metabolism, Plasmids, Probiotics, Prophages/*physiology, Restriction Mapping, Sequence Analysis, DNA | Genetics |
Enzymology | 16198511 | Enzymatic characterization of a maltogenic amylase from Lactobacillus gasseri ATCC 33323 expressed in Escherichia coli. | Oh KW, Kim MJ, Kim HY, Kim BY, Baik MY, Auh JH, Park CS | FEMS Microbiol Lett | 10.1016/j.femsle.2005.08.050 | 2005 | Cloning, Molecular, Escherichia coli/*enzymology/genetics, *Glycoside Hydrolases/chemistry/genetics/isolation & purification/metabolism, Hydrolysis, Lactobacillus/*enzymology/genetics, Maltose/metabolism, Recombinant Proteins/chemistry/genetics/isolation & purification/metabolism, Substrate Specificity | Metabolism |
16348621 | High-Frequency Plasmid Transduction by Lactobacillus gasseri Bacteriophage phiadh. | Raya RR, Klaenhammer TR | Appl Environ Microbiol | 10.1128/aem.58.1.187-193.1992 | 1992 | |||
Pathogenicity | 16469059 | Strong immunostimulatory activity of AT-oligodeoxynucleotide requires a six-base loop with a self-stabilized 5'-C...G-3' stem structure. | Shimosato T, Kimura T, Tohno M, Iliev ID, Katoh S, Ito Y, Kawai Y, Sasaki T, Saito T, Kitazawa H | Cell Microbiol | 10.1111/j.1462-5822.2005.00640.x | 2006 | AT Rich Sequence/*immunology, Animals, Base Sequence, CHO Cells, Cricetinae, Humans, Intestines/cytology/immunology, Lactobacillus/chemistry/*immunology, Leukocytes, Mononuclear/immunology, Molecular Sequence Data, Oligodeoxyribonucleotides/*chemistry/*immunology, Peyer's Patches/cytology/immunology, *Probiotics, Swine, Toll-Like Receptor 9/genetics, Transfection | Genetics |
Genetics | 16672450 | Comparative genomics and transcriptional analysis of prophages identified in the genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei. | Ventura M, Canchaya C, Bernini V, Altermann E, Barrangou R, McGrath S, Claesson MJ, Li Y, Leahy S, Walker CD, Zink R, Neviani E, Steele J, Broadbent J, Klaenhammer TR, Fitzgerald GF, O'toole PW, van Sinderen D | Appl Environ Microbiol | 10.1128/AEM.72.5.3130-3146.2006 | 2006 | Animals, Base Sequence, Genome, Bacterial, Genome, Viral, *Genomics, Humans, Lactobacillus/genetics/*virology, Lactobacillus casei/virology, Molecular Sequence Data, Phylogeny, *Prophages/classification/genetics/isolation & purification/metabolism, Sequence Analysis, DNA, *Siphoviridae/classification/genetics/isolation & purification/metabolism, *Transcription, Genetic, Viral Proteins/genetics/metabolism | Phylogeny |
Genetics | 17920212 | Mutational and biochemical analyses of the endolysin Lys(gaY) encoded by the Lactobacillus gasseri JCM 1131T phage phi gaY. | Sugahara K, Yokoi KJ, Nakamura Y, Nishino T, Yamakawa A, Taketo A, Kodaira K | Gene | 10.1016/j.gene.2007.08.023 | 2007 | Amino Acid Sequence, Bacillus Phages/*enzymology/genetics, DNA Mutational Analysis, Endopeptidases/*chemistry/*genetics/metabolism, Lactobacillus/*virology, Molecular Sequence Data, Protein Structure, Tertiary | Enzymology |
Metabolism | 18062231 | Extracellular secretion of a maltogenic amylase from Lactobacillus gasseri ATCC33323 in Lactococcus lactis MG1363 and its application on the production of branched maltooligosaccharides. | Cho MH, Park SE, Lee MH, Ha SJ, Kim HY, Kim MJ, Lee SJ, Madsen SM, Park CS | J Microbiol Biotechnol | 2007 | Amylases/chemistry/*genetics/*metabolism, Cloning, Molecular, Gene Expression Regulation, Bacterial, Hydrogen-Ion Concentration, Lactobacillus/*enzymology/genetics, Lactococcus lactis/genetics/*metabolism, Maltose/*metabolism, Oligosaccharides/*biosynthesis, Recombinant Proteins/chemistry/genetics/isolation & purification/metabolism, Temperature | Enzymology | |
Metabolism | 18240137 | ClpL is essential for induction of thermotolerance and is potentially part of the HrcA regulon in Lactobacillus gasseri. | Suokko A, Poutanen M, Savijoki K, Kalkkinen N, Varmanen P | Proteomics | 10.1002/pmic.200700925 | 2008 | Bacterial Proteins/*metabolism, Base Sequence, DNA-Binding Proteins/metabolism, Electrophoresis, Gel, Two-Dimensional, Electrophoretic Mobility Shift Assay, Endopeptidase Clp/*genetics, Gene Expression Regulation, Bacterial, Heat-Shock Response, Lactobacillus/*genetics/physiology, Molecular Sequence Data, Promoter Regions, Genetic, Regulon, Repressor Proteins/*metabolism | Enzymology |
Cultivation | 18411284 | Inhibition of Neisseria gonorrhoeae epithelial cell interactions by vaginal Lactobacillus species. | Spurbeck RR, Arvidson CG | Infect Immun | 10.1128/IAI.00101-08 | 2008 | *Antibiosis, Bacterial Adhesion, Cell Line, Coculture Techniques, Culture Media, Endometrium/cytology/*microbiology, Epithelial Cells/*microbiology, Female, Humans, Hydrogen Peroxide/metabolism, *Lactobacillus/classification/growth & development/metabolism, Neisseria gonorrhoeae/growth & development/*pathogenicity/physiology, Vagina/*microbiology | Pathogenicity |
Genetics | 18539810 | Analysis of the genome sequence of Lactobacillus gasseri ATCC 33323 reveals the molecular basis of an autochthonous intestinal organism. | Azcarate-Peril MA, Altermann E, Goh YJ, Tallon R, Sanozky-Dawes RB, Pfeiler EA, O'Flaherty S, Buck BL, Dobson A, Duong T, Miller MJ, Barrangou R, Klaenhammer TR | Appl Environ Microbiol | 10.1128/AEM.00054-08 | 2008 | Adult, Bacterial Adhesion/genetics/physiology, Bacterial Proteins/genetics, Child, DNA Primers, Gastrointestinal Tract/*microbiology, Genes, Bacterial, *Genome, Bacterial, Humans, Infant, Newborn, Intestines/*microbiology, Lactobacillus/*genetics/isolation & purification/pathogenicity, Open Reading Frames | Pathogenicity |
Enzymology | 18603798 | Identification of five phospho-beta-glycosidases from Lactobacillus gasseri ATCC33323T cultured in lactose medium. | Nagaoka S, Honda H, Ohshima S, Kawai Y, Kitazawa H, Tateno Y, Yamazaki Y, Saito T | Biosci Biotechnol Biochem | 10.1271/bbb.80089 | 2008 | Chromatography, Gene Expression/drug effects, Glucose/pharmacology, Lactobacillus/*enzymology/metabolism, Lactose/*pharmacology, Microbiological Techniques, Phosphoproteins/isolation & purification, beta-Galactosidase/*isolation & purification | Phylogeny |
Enzymology | 19114506 | DNA sequencing and homologous expression of a small peptide conferring immunity to gassericin A, a circular bacteriocin produced by Lactobacillus gasseri LA39. | Kawai Y, Kusnadi J, Kemperman R, Kok J, Ito Y, Endo M, Arakawa K, Uchida H, Nishimura J, Kitazawa H, Saito T | Appl Environ Microbiol | 10.1128/AEM.02485-08 | 2008 | Amino Acid Sequence, Anti-Bacterial Agents/*antagonists & inhibitors/pharmacology, Bacterial Proteins/*genetics/metabolism, Bacteriocins/*antagonists & inhibitors/pharmacology, Cloning, Molecular, DNA, Bacterial/chemistry/genetics, *Drug Resistance, Bacterial, Gene Order, Lactobacillus/*drug effects/genetics, Metabolic Networks and Pathways, Molecular Sequence Data, Open Reading Frames, Sequence Analysis, DNA, Sequence Homology, Amino Acid | Genetics |
Pathogenicity | 19296164 | Characterization of temperate Lactobacillus gasseri phage LgaI and its impact as prophage on autolysis of its lysogenic host strains. | Ismail EA, Neve H, Geis A, Heller KJ | Curr Microbiol | 10.1007/s00284-009-9384-0 | 2009 | *Bacteriolysis, Bacteriophages/*physiology/ultrastructure, *Host-Pathogen Interactions, Lactobacillus/physiology/*virology, *Lysogeny, Prophages/*physiology/ultrastructure | |
Enzymology | 19666732 | Conjugative plasmid from Lactobacillus gasseri LA39 that carries genes for production of and immunity to the circular bacteriocin gassericin A. | Ito Y, Kawai Y, Arakawa K, Honme Y, Sasaki T, Saito T | Appl Environ Microbiol | 10.1128/AEM.00195-09 | 2009 | Anti-Bacterial Agents/*biosynthesis, Bacteriocins/*biosynthesis/genetics, Cloning, Molecular, *Conjugation, Genetic, DNA, Bacterial/chemistry/genetics, *Drug Resistance, Bacterial, Gene Order, *Genes, Bacterial, Lactobacillus/drug effects/*genetics, Molecular Sequence Data, Open Reading Frames, *Plasmids, Sequence Analysis, DNA, Sequence Homology, Amino Acid, Transformation, Bacterial | Genetics |
Metabolism | 19903951 | Immunomodulation in gut-associated lymphoid tissue of neonatal chicks by immunobiotic diets. | Sato K, Takahashi K, Tohno M, Miura Y, Kamada T, Ikegami S, Kitazawa H | Poult Sci | 10.3382/ps.2009-00291 | 2009 | Animal Feed, Animal Nutritional Physiological Phenomena, Animals, Animals, Newborn, B-Lymphocytes/physiology, Bursa of Fabricius/*physiology, *Chickens, Cytokines/genetics/metabolism, Diet/*veterinary, Gene Expression Regulation/physiology, Immunomodulation/*drug effects, Lactobacillus, Lymphoid Tissue/*physiology, Male, RNA, Messenger/metabolism, T-Lymphocytes/physiology, Toll-Like Receptors/genetics/metabolism | Pathogenicity |
Enzymology | 20075040 | Inulin and levan synthesis by probiotic Lactobacillus gasseri strains: characterization of three novel fructansucrase enzymes and their fructan products. | Anwar MA, Kralj S, Pique AV, Leemhuis H, van der Maarel MJEC, Dijkhuizen L | Microbiology (Reading) | 10.1099/mic.0.036616-0 | 2010 | Bacterial Proteins/chemistry/*genetics/metabolism, Cloning, Molecular, Fructans/*metabolism, Glycoside Hydrolases/*chemistry/*genetics/metabolism, Inulin/*metabolism, Kinetics, Lactobacillus/chemistry/*enzymology/genetics/metabolism, Molecular Sequence Data, Probiotics/*metabolism, Substrate Specificity | Metabolism |
Metabolism | 20226062 | The PTS transporters of Lactobacillus gasseri ATCC 33323. | Francl AL, Thongaram T, Miller MJ | BMC Microbiol | 10.1186/1471-2180-10-77 | 2010 | Carbohydrate Metabolism, Cell Proliferation, Computational Biology, Gene Expression Profiling, Gene Silencing, Genetic Variation, Lactobacillus/genetics/*metabolism, Mutagenesis, Insertional, Phosphoenolpyruvate Sugar Phosphotransferase System/genetics/*metabolism, Polymerase Chain Reaction | |
Phylogeny | 20849602 | Characterization of a novel Lactobacillus species closely related to Lactobacillus johnsonii using a combination of molecular and comparative genomics methods. | Sarmiento-Rubiano LA, Berger B, Moine D, Zuniga M, Perez-Martinez G, Yebra MJ | BMC Genomics | 10.1186/1471-2164-11-504 | 2010 | Animals, Bacterial Proteins/genetics/metabolism, Comparative Genomic Hybridization/*methods, Conserved Sequence/genetics, DNA, Bacterial/genetics, Electrophoresis, Polyacrylamide Gel, Gene Expression Regulation, Bacterial, Genetic Loci/genetics, Genome, Bacterial/*genetics, Genomics/*methods, Lactobacillus/*genetics/isolation & purification, Nucleic Acid Hybridization, Oligonucleotide Array Sequence Analysis, Phenotype, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rats, Reproducibility of Results, Sequence Analysis, DNA, Species Specificity | Genetics |
21484153 | Group-specific comparison of four lactobacilli isolated from human sources using differential blast analysis. | Altermann E, Klaenhammer TR | Genes Nutr | 10.1007/s12263-010-0191-9 | 2010 | |||
Metabolism | 22282520 | Identification of lactose phosphotransferase systems in Lactobacillus gasseri ATCC 33323 required for lactose utilization. | Francl AL, Hoeflinger JL, Miller MJ | Microbiology (Reading) | 10.1099/mic.0.052928-0 | 2012 | Bacterial Proteins/genetics/*metabolism, Computational Biology, Culture Media/metabolism, Gene Expression Regulation, Bacterial, Gene Knockout Techniques, Genes, Bacterial, Lactobacillus/*enzymology/genetics/growth & development, Lactose/*metabolism, Phosphoenolpyruvate Sugar Phosphotransferase System/genetics/*metabolism, Transcriptome | Transcriptome |
Enzymology | 22449746 | Purification and characterization of two phospho-beta-galactosidases, LacG1 and LacG2, from Lactobacillus gasseri ATCC33323(T). | Honda H, Nagaoka S, Kawai Y, Kemperman R, Kok J, Yamazaki Y, Tateno Y, Kitazawa H, Saito T | J Gen Appl Microbiol | 10.2323/jgam.58.11 | 2012 | Bacterial Proteins/chemistry/genetics/*isolation & purification, Base Sequence, Catalytic Domain, Cluster Analysis, Culture Media/chemistry, Electrophoresis, Polyacrylamide Gel, Enzyme Activation, Enzyme Assays, Gene Expression Regulation, Bacterial, Gene Expression Regulation, Enzymologic, Glycoside Hydrolases/chemistry/*classification/genetics/*isolation & purification, Kinetics, Lactobacillus/*enzymology/genetics, Lactose/chemistry, Nitrophenylgalactosides/chemical synthesis/chemistry, Phylogeny, Recombinant Proteins/chemistry/genetics, Substrate Specificity | Phylogeny |
Metabolism | 23503311 | Characterization of a Lactobacillus gasseri JCM 1131T lipoteichoic acid with a novel glycolipid anchor structure. | Shiraishi T, Yokota S, Morita N, Fukiya S, Tomita S, Tanaka N, Okada S, Yokota A | Appl Environ Microbiol | 10.1128/AEM.00243-13 | 2013 | Alanine/chemistry, Amino Acid Substitution, Cell Membrane/chemistry, Fatty Acids/chemistry, Glycerol/metabolism, Glycerophosphates/chemistry, Glycolipids/*chemistry, Hexoses/chemistry, Lactobacillus/*chemistry/genetics, Lipopolysaccharides/*chemistry, Teichoic Acids/*chemistry | |
Phylogeny | 24478214 | Lactobacillus rodentium sp. nov., from the digestive tract of wild rodents. | Killer J, Havlik J, Vlkova E, Rada V, Pechar R, Benada O, Kopecny J, Kofronova O, Sechovcova H | Int J Syst Evol Microbiol | 10.1099/ijs.0.054924-0 | 2014 | Animals, Bacterial Typing Techniques, Base Composition, Czech Republic, DNA, Bacterial/genetics, Fatty Acids/chemistry, Fermentation, Genes, Bacterial, Intestine, Small/*microbiology, Lactobacillus/*classification/genetics/isolation & purification, Mice/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Rectum/microbiology, Sequence Analysis, DNA | Genetics |
Pathogenicity | 24492360 | Sustained delivery of commensal bacteria from pod-intravaginal rings. | Gunawardana M, Mullen M, Yoo J, Webster P, Moss JA, Baum MM | Antimicrob Agents Chemother | 10.1128/AAC.02542-13 | 2014 | *Administration, Intravaginal, Delayed-Action Preparations, Drug Delivery Systems/*methods, Female, Humans, Lactobacillus/physiology, Probiotics/*administration & dosage, Vagina/*microbiology | |
Enzymology | 24682298 | Spontaneously induced prophages in Lactobacillus gasseri contribute to horizontal gene transfer. | Baugher JL, Durmaz E, Klaenhammer TR | Appl Environ Microbiol | 10.1128/AEM.04092-13 | 2014 | Bacteriophages/*genetics/isolation & purification/physiology, DNA, Viral/chemistry/genetics, *Gene Transfer, Horizontal, Host Specificity, Lactobacillus/*virology, Molecular Sequence Data, Plasmids, Prophages/*genetics/isolation & purification/physiology, Sequence Analysis, DNA, Transduction, Genetic, *Virus Activation | Phylogeny |
Metabolism | 24837903 | Development of an integration mutagenesis system in Lactobacillus gasseri. | Selle K, Goh YJ, O'Flaherty S, Klaenhammer TR | Gut Microbes | 10.4161/gmic.29101 | 2014 | Bacterial Adhesion, Cell Line, Epithelial Cells/microbiology, Gene Deletion, Genetics, Microbial/*methods, Humans, Lactobacillus/genetics/*physiology, Lipopolysaccharides/*metabolism, Mutagenesis, Insertional/*methods, Selection, Genetic, Teichoic Acids/*metabolism, Transferases (Other Substituted Phosphate Groups)/genetics/*metabolism | Pathogenicity |
Metabolism | 25500495 | Sortase-deficient lactobacilli: effect on immunomodulation and gut retention. | Call EK, Goh YJ, Selle K, Klaenhammer TR, O'Flaherty S | Microbiology (Reading) | 10.1099/mic.0.000007 | 2014 | Aminoacyltransferases/genetics/immunology/*metabolism, Animals, *Bacterial Adhesion, Bacterial Proteins/genetics/immunology/*metabolism, Caco-2 Cells, Cysteine Endopeptidases/genetics/immunology/*metabolism, Dendritic Cells/immunology/microbiology, Gastrointestinal Tract/immunology/*microbiology, Humans, Immunomodulation, Lactobacillus/*enzymology/genetics/growth & development/*physiology, Lactobacillus acidophilus/*enzymology/genetics/growth & development/*physiology, Mice, Swine, Tumor Necrosis Factor-alpha/immunology | Pathogenicity |
Metabolism | 25529420 | Lactobacillus gasseri requires peptides, not proteins or free amino acids, for growth in milk. | Arakawa K, Matsunaga K, Takihiro S, Moritoki A, Ryuto S, Kawai Y, Masuda T, Miyamoto T | J Dairy Sci | 10.3168/jds.2014-8860 | 2014 | Amino Acids/metabolism, Animals, Caseins/metabolism, Cattle, Chymotrypsin/metabolism, Gastrointestinal Tract/microbiology, Lactobacillus/*growth & development, Milk/chemistry/*microbiology, Nitrogen/chemistry, Pepsin A/metabolism, Peptide Fragments/metabolism, Peptide Hydrolases/metabolism, Peptides/*metabolism, Probiotics/metabolism | |
Metabolism | 25884980 | Lactobacillus gasseri SBT2055 suppresses fatty acid release through enlargement of fat emulsion size in vitro and promotes fecal fat excretion in healthy Japanese subjects. | Ogawa A, Kobayashi T, Sakai F, Kadooka Y, Kawasaki Y | Lipids Health Dis | 10.1186/s12944-015-0019-0 | 2015 | Adult, Aged, Double-Blind Method, Emulsions/metabolism, Fats/analysis/*metabolism, Fatty Acids/*metabolism, Feces/*chemistry, Female, Humans, Hymecromone/analogs & derivatives/metabolism, Japan, Lactobacillus/*metabolism, Lipase/metabolism, Male, Middle Aged, Particle Size | Pathogenicity |
Metabolism | 25917402 | A Moonlighting Enolase from Lactobacillus gasseri does not Require Enzymatic Activity to Inhibit Neisseria gonorrhoeae Adherence to Epithelial Cells. | Spurbeck RR, Harris PT, Raghunathan K, Arvidson DN, Arvidson CG | Probiotics Antimicrob Proteins | 10.1007/s12602-015-9192-8 | 2015 | Bacterial Adhesion, Bacterial Proteins/genetics/*metabolism, Cell Line, Tumor, Cells, Cultured, Epithelial Cells/*microbiology, Gonorrhea/therapy, Humans, Lactobacillus/*enzymology/genetics, Membrane Proteins/genetics/metabolism, Mutagenesis, Insertional, Neisseria gonorrhoeae/*growth & development, Phosphopyruvate Hydratase/genetics/*metabolism, RNA, Bacterial/genetics, Sequence Analysis, RNA | Pathogenicity |
Pathogenicity | 27904056 | Prophylactic Effect of Lactobacillus pentosus strain S-PT84 on Candida Infection and Gastric Inflammation in a Murine Gastrointestinal Candidiasis Model. | Maekawa T, Ishijima AS, Ida M, Izumo T, Ono Y, Shibata H, Abe S | Med Mycol J | 10.3314/mmj.16-00012 | 2016 | Administration, Oral, Animals, *Antibiosis, Candida albicans/*growth & development, Candidiasis/*prevention & control, Capillary Permeability, Disease Models, Animal, Female, Gastrointestinal Diseases/*prevention & control, Inflammation/*prevention & control, *Lactobacillus pentosus, Mice, Inbred ICR, *Neutrophil Infiltration, Probiotics/*administration & dosage, Severity of Illness Index, Stomach/microbiology | |
Pathogenicity | 27904074 | Prophylactic Effect of Lactobacillus pentosus strain S-PT84 on Candida Infection and Gastric Inflammation in a Murine Gastrointestinal Candidiasis Model [Errata]. | Maekawa T, Ishijima AS, Ida M, Izumo T, Ono Y, Shibata H, Abe S | Med Mycol J | 10.3314/mmj.16-00012E | 2016 | Administration, Oral, Animals, *Antibiosis, Candida albicans/*growth & development, Candidiasis/*prevention & control, Capillary Permeability, Disease Models, Animal, Female, Gastrointestinal Diseases/*prevention & control, Inflammation/*prevention & control, *Lactobacillus pentosus, Mice, Inbred ICR, *Neutrophil Infiltration, Probiotics/*administration & dosage, Severity of Illness Index, Stomach/microbiology | |
29038772 | Revealing the genomic differences between two subgroups in Lactobacillus gasseri. | Tada I, Tanizawa Y, Endo A, Tohno M, Arita M | Biosci Microbiota Food Health | 10.12938/bmfh.17-006 | 2017 | |||
Metabolism | 29633638 | Lipoteichoic acids are embedded in cell walls during logarithmic phase, but exposed on membrane vesicles in Lactobacillus gasseri JCM 1131(T). | Shiraishi T, Yokota S, Sato Y, Ito T, Fukiya S, Yamamoto S, Sato T, Yokota A | Benef Microbes | 10.3920/BM2017.0124 | 2018 | Antibodies, Monoclonal/metabolism, Antigens, Surface/*metabolism, Cell Membrane/chemistry/*metabolism/ultrastructure, Cell Wall/chemistry/*metabolism, Lactobacillus fermentum, Lactobacillus gasseri/chemistry/growth & development/*physiology/ultrastructure, Lactobacillus rhamnosus, Lipopolysaccharides/*metabolism, Probiotics, Protein Binding, Teichoic Acids/*metabolism | |
Metabolism | 29883797 | The membrane phospholipid cardiolipin plays a pivotal role in bile acid adaptation by Lactobacillus gasseri JCM1131(T). | Kato S, Tobe H, Matsubara H, Sawada M, Sasaki Y, Fukiya S, Morita N, Yokota A | Biochim Biophys Acta Mol Cell Biol Lipids | 10.1016/j.bbalip.2018.06.004 | 2018 | Bile Acids and Salts/*metabolism/physiology, Cardiolipins/*metabolism/physiology, Cell Membrane/metabolism, Cholic Acid/metabolism, Glycolipids/metabolism/physiology, Lactobacillus gasseri/metabolism/physiology, Membrane Lipids/metabolism, Membrane Proteins/metabolism, Membranes/metabolism, Phosphatidylglycerols/metabolism, Phospholipids/metabolism, Transferases (Other Substituted Phosphate Groups)/metabolism | Lipids |
Phylogeny | 30226464 | Lactobacillus paragasseri sp. nov., a sister taxon of Lactobacillus gasseri, based on whole-genome sequence analyses. | Tanizawa Y, Tada I, Kobayashi H, Endo A, Maeno S, Toyoda A, Arita M, Nakamura Y, Sakamoto M, Ohkuma M, Tohno M | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003020 | 2018 | Bacterial Typing Techniques, DNA, Bacterial/genetics, DNA-Directed RNA Polymerases/genetics, Fatty Acids/chemistry, *Genome, Bacterial, Lactobacillus/*classification/genetics, Lactobacillus gasseri, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Genetics |
30842760 | Lactobacillus gasseri APC 678 Reduces Shedding of the Pathogen Clostridium difficile in a Murine Model. | Quigley L, Coakley M, Alemayehu D, Rea MC, Casey PG, O'Sullivan O, Murphy E, Kiely B, Cotter PD, Hill C, Ross RP | Front Microbiol | 10.3389/fmicb.2019.00273 | 2019 | |||
Metabolism | 32656603 | Metabolically engineered Lactobacillus gasseri JCM 1131 as a novel producer of optically pure L- and D-lactate. | Zunar B, Trontel A, Svetec Miklenic M, Prah JL, Stafa A, Mardetko N, Novak M, Santek B, Svetec IK | World J Microbiol Biotechnol | 10.1007/s11274-020-02887-2 | 2020 | Bacillus megaterium/genetics/metabolism, Culture Media/chemistry, Fermentation, Glucose/metabolism, Hydrolysis, L-Lactate Dehydrogenase/genetics/metabolism, Lactic Acid/*metabolism, Lactobacillus gasseri/*genetics/metabolism, Lignin/metabolism, *Metabolic Engineering, Microorganisms, Genetically-Modified/*genetics, Plasmids/genetics | Cultivation |
Pathogenicity | 33206342 | Effects of a Potential Probiotic Strain Lactobacillus gasseri ATCC 33323 on Helicobacter pylori-Induced Inflammatory Response and Gene Expression in Coinfected Gastric Epithelial Cells. | Yarmohammadi M, Yadegar A, Ebrahimi MT, Zali MR | Probiotics Antimicrob Proteins | 10.1007/s12602-020-09721-z | 2020 | Cell Line, Tumor, *Coinfection, Epithelial Cells/*microbiology, Gene Expression, *Helicobacter pylori/pathogenicity, Humans, Integrins/genetics, Interleukin-8/genetics, *Lactobacillus gasseri/physiology, *Probiotics, Proto-Oncogene Proteins c-bcl-2/genetics, RNA, Messenger, beta Catenin/genetics | |
Genetics | 33397707 | Portable CRISPR-Cas9(N) System for Flexible Genome Engineering in Lactobacillus acidophilus, Lactobacillus gasseri, and Lactobacillus paracasei. | Goh YJ, Barrangou R | Appl Environ Microbiol | 10.1128/AEM.02669-20 | 2021 | *CRISPR-Associated Protein 9, *CRISPR-Cas Systems, *Deoxyribonuclease I, Gene Editing/*methods, Genome, Bacterial, Lactobacillus acidophilus/*genetics, Lactobacillus gasseri/*genetics, Lactobacillus paracasei/*genetics | Biotechnology |
34066735 | Identification of Bile Salt Hydrolase and Bile Salt Resistance in a Probiotic Bacterium Lactobacillus gasseri JCM1131(T). | Kusada H, Morinaga K, Tamaki H | Microorganisms | 10.3390/microorganisms9051011 | 2021 | |||
Metabolism | 34442669 | Oligosaccharide Metabolism and Lipoteichoic Acid Production in Lactobacillus gasseri and Lactobacillus paragasseri. | Shiraishi T, Maeno S, Kishi S, Fujii T, Tanno H, Hirano K, Tochio T, Tanizawa Y, Arita M, Yokota SI, Endo A | Microorganisms | 10.3390/microorganisms9081590 | 2021 | Biotechnology | |
Phylogeny | 34721319 | Comparison of 16S rRNA Gene Based Microbial Profiling Using Five Next-Generation Sequencers and Various Primers. | Park C, Kim SB, Choi SH, Kim S | Front Microbiol | 10.3389/fmicb.2021.715500 | 2021 | ||
Pathogenicity | 34948426 | Engineering of Vaginal Lactobacilli to Express Fluorescent Proteins Enables the Analysis of Their Mixture in Nanofibers. | Stojanov S, Plavec TV, Kristl J, Zupancic S, Berlec A | Int J Mol Sci | 10.3390/ijms222413631 | 2021 | Female, Green Fluorescent Proteins/genetics, Humans, Lactobacillus/*genetics, Lactobacillus crispatus/genetics, Lactobacillus gasseri/genetics, Lactobacillus plantarum, Luminescent Proteins/*genetics, *Microorganisms, Genetically-Modified, *Probiotics, Vagina/*microbiology | Biotechnology |
35796949 | Goji Ferment Ameliorated Acetaminophen-Induced Liver Injury in vitro and in vivo. | Yang CM, Chien MY, Wang LY, Chuang CH, Chen CH | Probiotics Antimicrob Proteins | 10.1007/s12602-022-09956-y | 2022 | |||
Pathogenicity | 35799214 | Lactobacilli displacement and Candida albicans inhibition on initial adhesion assays: a probiotic analysis. | Rodriguez-Arias RJ, Guachi-Alvarez BO, Montalvo-Vivero DE, Machado A | BMC Res Notes | 10.1186/s13104-022-06114-z | 2022 | Candida albicans, *Candidiasis, Female, Humans, Lactobacillus/physiology, *Probiotics/pharmacology, Vagina | |
Metabolism | 36411410 | Anti-Helicobacter pylori activity of potential probiotic Lactiplantibacillus pentosus SLC13. | Thuy TTD, Kuo PY, Lin SM, Kao CY | BMC Microbiol | 10.1186/s12866-022-02701-z | 2022 | Humans, *Helicobacter pylori/metabolism, Urease/metabolism, Interleukin-8/metabolism, *Fatigue Syndrome, Chronic, Bacterial Adhesion, *Helicobacter Infections/drug therapy, *Probiotics/pharmacology/metabolism, Lactobacillus/physiology | Pathogenicity |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
8654 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20243) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-20243 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
40500 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/14738 | ||||
50606 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 31451) | https://www.ccug.se/strain?id=31451 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
68371 | Automatically annotated from API 50CH acid | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
75938 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID7309.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
75939 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID312265.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
119540 | Curators of the CIP | Collection of Institut Pasteur (CIP 102991) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102991 |