Strain identifier

BacDive ID: 6457

Type strain: No

Species: Limosilactobacillus fermentum

Strain Designation: 27

Strain history: <- H. Stetter, 27

NCBI tax ID(s): 1613 (species)

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General

@ref: 8453

BacDive-ID: 6457

DSM-Number: 20049

keywords: Bacteria, mesophilic, human pathogen

description: Limosilactobacillus fermentum 27 is a mesophilic human pathogen that was isolated from vegetable juice.

NCBI tax id

  • NCBI tax id: 1613
  • Matching level: species

strain history

  • @ref: 8453
  • history: <- H. Stetter, 27

doi: 10.13145/bacdive6457.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Limosilactobacillus
  • species: Limosilactobacillus fermentum
  • full scientific name: Limosilactobacillus fermentum (Beijerinck 1901) Zheng et al. 2020

  • synonyms

    @refsynonym
    20215Lactobacillus cellobiosus
    20215Lactobacillus fermentum

@ref: 8453

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Limosilactobacillus

species: Limosilactobacillus fermentum

full scientific name: Limosilactobacillus fermentum (Beijerinck 1901) Zheng et al. 2020

strain designation: 27

type strain: no

Culture and growth conditions

culture medium

  • @ref: 8453
  • name: MRS MEDIUM (DSMZ Medium 11)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/11
  • composition: Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water

culture temp

  • @ref: 8453
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

murein

  • @ref: 8453
  • murein short key: A21.04
  • type: A4ß L-Orn-D-Asp

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 2-ketogluconate-builds acid from
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose+builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose-builds acid from27082
68371sucrose+builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine-builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose-builds acid from17634
68371D-galactose-builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose+builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol-builds acid from17754

API 50CHac

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
8453----++------+------------------+---+--------------
8453----++------+------------------+---+-----------+-+
8453----++------+---------------+--+---+-----------+/--+

Isolation, sampling and environmental information

isolation

  • @ref: 8453
  • sample type: vegetable juice

isolation source categories

Cat1Cat2Cat3
#Engineered#Food production#Beverage
#Host#Plants
#Host Body-Site#Plant#Fruit (Seed)
#Host Body Product#Plant#Juice (natural)

Safety information

risk assessment

  • @ref: 8453
  • pathogenicity human: yes, in single cases
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

GC content

  • @ref: 8453
  • GC-content: 51.1

External links

@ref: 8453

culture collection no.: DSM 20049

straininfo link

  • @ref: 75930
  • straininfo: 49569

literature

  • Pubmed-ID: 35547125
  • title: Exploring the Therapeutic Potentials of Exopolysaccharides Derived From Lactic Acid Bacteria and Bifidobacteria: Antioxidant, Antitumor, and Periodontal Regeneration.
  • authors: Khalil MA, Sonbol FI, Al-Madboly LA, Aboshady TA, Alqurashi AS, Ali SS
  • journal: Front Microbiol
  • DOI: 10.3389/fmicb.2022.803688
  • year: 2022

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8453Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20049)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20049
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
68371Automatically annotated from API 50CH acid
75930Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49569.1StrainInfo: A central database for resolving microbial strain identifiers