Strain identifier

BacDive ID: 6427

Type strain: Yes

Species: Lacticaseibacillus rhamnosus

Strain history: ATCC 7469 <-- F. M. Strong (Lactobacillus casei).

NCBI tax ID(s): 47715 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 8433

BacDive-ID: 6427

DSM-Number: 20021

keywords: mesophilic, anaerobe, Bacteria, 16S sequence, genome sequence

description: Lacticaseibacillus rhamnosus DSM 20021 is an anaerobe, mesophilic bacterium of the family Lactobacillaceae.

NCBI tax id

  • NCBI tax id: 47715
  • Matching level: species

strain history

doi: 10.13145/bacdive6427.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Lacticaseibacillus
  • species: Lacticaseibacillus rhamnosus
  • full scientific name: Lacticaseibacillus rhamnosus (Hansen 1968) Zheng et al. 2020
  • synonyms

    @refsynonym
    20215Lactobacillus casei subsp. rhamnosus
    20215Lactobacillus rhamnosus

@ref: 8433

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Lactobacillaceae

genus: Lacticaseibacillus

species: Lacticaseibacillus rhamnosus

full scientific name: Lacticaseibacillus rhamnosus (Hansen 1968) Zheng et al. 2020

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
8433COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://bacmedia.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
8433TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://bacmedia.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
8433MRS MEDIUM (DSMZ Medium 11)yeshttps://bacmedia.dsmz.de/medium/11Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
41838MEDIUM 40- for Lactobacillus and LeuconostocyesDistilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g)

culture temp

@refgrowthtypetemperaturerange
8433positivegrowth37mesophilic
41838positivegrowth37mesophilic
47413positivegrowth37mesophilic
67770positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
47413anaerobe
47413microaerophile

murein

  • @ref: 8433
  • murein short key: A11.31
  • type: A4alpha L-Lys-D-Asp

observation

  • @ref: 67770
  • observation: Assay of Folic acid, riboflavin, panthothenic, nicotinic and glutamic acids, pyridoxal and arginine, azothiopurine and 6-mercaptopurine

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837430911sorbitol-builds acid from
6837417057cellobiose-builds acid from
6837417268myo-inositol-builds acid from
6837462345L-rhamnose-builds acid from
6837427082trehalose-builds acid from
6837418333D-arabitol-builds acid from
6837430849L-arabinose-builds acid from
6837417992sucrose-builds acid from
6837417634D-glucose-builds acid from
6837427897tryptophan-energy source
6837415792malonate-assimilation
6837418394palatinose-builds acid from
6837415963ribitol-builds acid from
6837417306maltose-builds acid from
6837416899D-mannitol-builds acid from
68374Potassium 5-ketogluconate-builds acid from
6837418024D-galacturonic acid-builds acid from
6837418403L-arabitol-builds acid from
6837416199urea-hydrolysis
6837425094lysine-degradation
6837429016arginine-hydrolysis
6837418257ornithine-degradation
6837928087glycogen-fermentation
6837917992sucrose+fermentation
6837917716lactose+fermentation
6837917306maltose+fermentation
6837916899D-mannitol+fermentation
6837965327D-xylose-fermentation
6837916988D-ribose+fermentation
683795291gelatin-hydrolysis
6837916199urea-hydrolysis
683794853esculin+hydrolysis
6837917632nitrate-reduction
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol-builds acid from
6837118287L-fucose-builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose+builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose+builds acid from
6837117151xylitol-builds acid from
6837128087glycogen-builds acid from
6837128017starch-builds acid from
6837116634raffinose-builds acid from
683716731melezitose+builds acid from
6837115443inulin-builds acid from
6837127082trehalose+builds acid from
6837128053melibiose-builds acid from
6837117716lactose+builds acid from
6837117057cellobiose+builds acid from
6837117814salicin+builds acid from
683714853esculin+builds acid from
6837118305arbutin+builds acid from
6837127613amygdalin+builds acid from
6837159640N-acetylglucosamine+builds acid from
68371320061methyl alpha-D-glucopyranoside+builds acid from
6837143943methyl alpha-D-mannoside-builds acid from
6837117924D-sorbitol+builds acid from
6837116899D-mannitol+builds acid from
6837117268myo-inositol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose+builds acid from
6837117266L-sorbose+builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837165327D-xylose-builds acid from
6837116988D-ribose+builds acid from
6837130849L-arabinose-builds acid from
6837117108D-arabinose-builds acid from
6837117113erythritol-builds acid from
6837117754glycerol-builds acid from
6838129016arginine-hydrolysis
6838116988D-ribose+builds acid from
6838116899D-mannitol+builds acid from
6838130911sorbitol-builds acid from
6838117716lactose-builds acid from
6838127082trehalose+builds acid from
6838116634raffinose-builds acid from
6838117992sucrose+builds acid from
6838130849L-arabinose-builds acid from
6838118333D-arabitol-builds acid from
6838140585alpha-cyclodextrin-builds acid from
68381606565hippurate+hydrolysis
6838128087glycogen-builds acid from
6838127941pullulan-builds acid from
6838117306maltose-builds acid from
6838128053melibiose-builds acid from
683816731melezitose+builds acid from
68381320055methyl beta-D-glucopyranoside-builds acid from
6838116443D-tagatose+builds acid from
6838116199urea-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6837435581indoleno
6838115688acetoinyes

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testindole test
6838115688acetoin+
6837435581indole-

enzymes

@refvalueactivityec
68381urease-3.5.1.5
68381beta-mannosidase-3.2.1.25
68381glycyl tryptophan arylamidase-
68381N-acetyl-beta-glucosaminidase+3.2.1.52
68381pyrrolidonyl arylamidase+3.4.19.3
68381beta-galactosidase+3.2.1.23
68381alkaline phosphatase-3.1.3.1
68381alpha-galactosidase-3.2.1.22
68381beta-glucuronidase-3.2.1.31
68381beta-glucosidase+3.2.1.21
68381arginine dihydrolase-3.5.3.6
68374L-aspartate arylamidase-3.4.11.21
68374alpha-maltosidase-
68374alpha-galactosidase-3.2.1.22
68374alpha-glucosidase-3.2.1.20
68374beta-galactosidase+3.2.1.23
68374N-acetyl-beta-glucosaminidase-3.2.1.52
68374beta-glucuronidase-3.2.1.31
68374beta-glucosidase+3.2.1.21
68374lipase+
68374urease-3.5.1.5
68374lysine decarboxylase-4.1.1.18
68374arginine dihydrolase-3.5.3.6
68374ornithine decarboxylase-4.1.1.17
68379catalase-1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase+3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase-3.5.1.B15

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlRIBXYLMANMALLACSACGLYGCAT
47413--++-++-+---+-++++--

API 50CHac

@refQGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
8433-----+-----+++++--++-+++++++-+--+-+-----+-+-------
8433-----+----++++++--++-++++++++/-+--+-+-----+-+-------
8433-----+----++++++--++-+++++++++--+-+----++-+-------
8433-----+----++++++--++-+++++++++-++-+-----+-+----+/---
8433-----+----++++++--++-+++++++++--+-+----++-+----+/---

API ID32E

@refODCADH ArgLDC LysURELARLGAT5KGLIPRPbeta GLUMANMALADOPLEbeta GURMNTINDbeta NAGbeta GALGLUSACLARADARLalpha GLUalpha GALTRERHAINOCELSORalphaMALAspA
47413-------+++--------+-------------

API rID32STR

@refADH Argbeta GLUbeta GARbeta GURalpha GALPALRIBMANSORLACTRERAFSACLARADARLCDEXVPAPPAbeta GALPyrAbeta NAGGTAHIPGLYGPULMALMELMLZMbeta DGTAGbeta MANURE
8433-+----++--+-+---++/-+++-+----+-+--

Safety information

risk assessment

  • @ref: 8433
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Lactobacillus rhamnosus gene for 16S rRNA, partial sequence, strain: YIT 0105 (= ATCC 7469)AB0082111540ena47715
20218Lactobacillus rhamnosus gene for 16S ribosomal RNA, partial sequence, strain: ATCC 7469, clone: BFAB759524722ena47715
20218Lactobacillus rhamnosus ATCC 7469a 16S ribosomal RNA gene, partial sequenceAF429476507ena47715
20218Lactobacillus rhamnosus ATCC 7469 16S ribosomal RNA gene, partial sequenceAF429485507ena47715
20218Lactobacillus rhamnosus strain ATCC 7469a 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceAF429563537ena47715
20218Lactobacillus rhamnosus strain ATCC 7469 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceAF429572537ena47715
20218Lactobacillus rhamnosus strain ATCC 7469 16S ribosomal RNA gene, partial sequenceJQ580982969ena47715
20218Lactobacillus rhamnosus 16S-23S rDNA intergenic spacer regionAF121201218ena47715
20218Lactobacillus rhamnosus strain DSM 20021 16S ribosomal RNA gene, partial sequenceHQ012008936ena47715
20218Lactobacillus casei 16S ribosomal RNAM588151514ena1582
20218Lactobacillus rhamnosus genes for 16S rRNA, 16S-23S internal transcribed spacer, tRNA-Ile, tRNA-Ala, 23S rRNA, partial and complete sequence, strain:JCM 1136AB237512578ena47715
20218Lactobacillus rhamnosus genes for 16S rRNA, 16S-23S internal transcribed spacer, 23S rRNA, partial sequence, strain:JCM 1136AB237513365ena47715
20218Lactobacillus rhamnosus gene for 16S rRNA, partial sequence, strain: JCM 1136AB289276616ena47715
20218Lactobacillus rhamnosus 16S ribosomal RNA, partial sequence; 16S/23S intergenic spacer region, complete sequence; and 23S ribosomal RNA partial sequenceAF182730686ena47715
20218Lactobacillus rhamnosus gene for 16S rRNAD165521521ena47715
20218Lactobacillus rhamnosus gene for 16S rRNA, partial sequence, strain: NBRC 3425AB6260491495ena47715
67770Lactobacillus rhamnosus gene for 16S ribosomal RNA, partial sequence, strain: JCM 1136LC1455531389ena47715

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 DSM 20021GCA_001435405scaffoldncbi1423797
66792Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 NBRC 3425GCA_007990855contigncbi1423797
66792Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 JCM 1136GCA_000615245contigncbi1423797
66792Lactobacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 34251423797.7wgspatric1423797
66792Lactobacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 34251423797.16wgspatric1423797
66792Lactobacillus rhamnosus JCM 11361236940.3wgspatric1423797
66792Lacticaseibacillus rhamnosus DSM 200212690315983draftimg1423797
66792Lacticaseibacillus rhamnosus JCM 11362585427882draftimg1423797
67770Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 strain DSM 20021, whole genome shotgun sequencing projectAZCQ00000000ncbi1423797
67770Lacticaseibacillus rhamnosus strain NRRL B-442, whole genome shotgun sequencing projectPKQF00000000ncbi47715

GC content

@refGC-contentmethod
843347.0
6777046.7genome sequence analysis
6777047

External links

@ref: 8433

culture collection no.: DSM 20021, ATCC 7469, CCM 1825, NCDO 243, NCIB 6375, WDCM 00101, CCUG 21452, NCTC 6375, JCM 1136, BCC 49729, BCRC 10940, CECT 278, CIP A157, IAM 1118, IFO 3425, KCTC 1046, LMG 6400, NBRC 3425, NCAIM B.01147, NCCB 46033, NCFB 243, NCIMB 6375, NCTC 12953, NRIC 1043, NRRL B-176, NRRL B-442, VKM B-574

straininfo link

@refpassport
20218http://www.straininfo.net/strains/14071
20218http://www.straininfo.net/strains/14065
20218http://www.straininfo.net/strains/94469
20218http://www.straininfo.net/strains/94470
20218http://www.straininfo.net/strains/866216

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Metabolism8896349Inducible transport of citrate in Lactobacillus rhamnosus ATCC 7469.de Figueroa RM, Benito de Cardenas IL, Sesma F, Alvarez F, de Ruiz Holgado AP, Oliver GJ Appl Bacteriol10.1111/j.1365-2672.1996.tb03518.x1996Biological Transport, Citric Acid/*metabolism, Culture Media, Cyclic AMP/pharmacology, Energy Metabolism, *Gene Expression Regulation, Bacterial, Glucose/pharmacology, Lactobacillus/drug effects/growth & development/*metabolismCultivation
Enzymology9227132Inhibition of purified enolases from oral bacteria by fluoride.Guha-Chowdhury N, Clark AG, Sissons CHOral Microbiol Immunol10.1111/j.1399-302x.1997.tb00623.x1997Actinomyces/drug effects/enzymology, Bacterial Proteins/*antagonists & inhibitors/metabolism, Cariostatic Agents/*pharmacology, Dose-Response Relationship, Drug, Enzyme Inhibitors/pharmacology, Fluorides/*pharmacology, Glycolysis/physiology, Hydrogen-Ion Concentration, Kinetics, Lactobacillus/drug effects/enzymology, Least-Squares Analysis, Mouth/microbiology, Phosphates/pharmacology, Phosphopyruvate Hydratase/*antagonists & inhibitors/metabolism, Streptococcus/*drug effects/*enzymologyPathogenicity
Pathogenicity9237125Lactobacillus rhamnosus GG (ATCC 53103) and platelet aggregation in vitro.Korpela R, Moilanen E, Saxelin M, Vapaatalo HInt J Food Microbiol10.1016/s0168-1605(97)00049-41997Adult, Humans, Lactobacillus/*pathogenicity, Middle Aged, *Platelet Aggregation
Metabolism10225909Insertional inactivation of genes responsible for the D-alanylation of lipoteichoic acid in Streptococcus gordonii DL1 (Challis) affects intrageneric coaggregations.Clemans DL, Kolenbrander PE, Debabov DV, Zhang Q, Lunsford RD, Sakone H, Whittaker CJ, Heaton MP, Neuhaus FCInfect Immun10.1128/IAI.67.5.2464-2474.19991999Adhesins, Bacterial/genetics/metabolism, Amino Acid Sequence, Bacterial Adhesion/*genetics/*physiology, Base Sequence, Cloning, Molecular, DNA Primers/genetics, DNA Transposable Elements/genetics, DNA, Bacterial/genetics, *Genes, Bacterial, Humans, Microscopy, Electron, Microscopy, Electron, Scanning, Molecular Sequence Data, Mouth/microbiology, Mutagenesis, Insertional, Sequence Homology, Amino Acid, Streptococcus/*genetics/*metabolism/ultrastructure, Teichoic Acids/*biosynthesisEnzymology
Phylogeny10473394Comparison of ribotyping, randomly amplified polymorphic DNA analysis, and pulsed-field gel electrophoresis in typing of Lactobacillus rhamnosus and L. casei strains.Tynkkynen S, Satokari R, Saarela M, Mattila-Sandholm T, Saxelin MAppl Environ Microbiol10.1128/AEM.65.9.3908-3914.19991999*Bacterial Typing Techniques, DNA Primers, Deoxyribonuclease EcoRI/metabolism, Electrophoresis, Gel, Pulsed-Field, Genes, rRNA, Genotype, Lactobacillus/*classification/*genetics, Lactobacillus casei/classification/genetics, Polymerase Chain Reaction/methods, Random Amplified Polymorphic DNA Technique, Species SpecificityEnzymology
Metabolism11297355Influence of temperature on flavour compound production from citrate by Lactobacillus rhamnosus ATCC 7469.De Figueroa RM, Oliver G, Benito de Cardenas ILMicrobiol Res10.1016/s0944-5013(01)80002-12001Acetoin/metabolism, Citric Acid/*metabolism, Diacetyl/metabolism, Flavoring Agents/*metabolism, Hydrogen-Ion Concentration, Lactobacillus/genetics/*metabolism, Temperature, Time FactorsBiotechnology
Phylogeny11316369Identification of salivary Lactobacillus rhamnosus species by DNA profiling and a specific probe.Richard B, Groisillier A, Badet C, Dorignac G, Lonvaud-Funel ARes Microbiol10.1016/s0923-2508(01)01187-12001*Bacterial Typing Techniques, *DNA Fingerprinting, *DNA Probes/isolation & purification, DNA, Bacterial/genetics, Genome, Bacterial, Humans, Lactobacillus casei/*classification/genetics/isolation & purification, Nucleic Acid Hybridization, Polymerase Chain Reaction, Random Amplified Polymorphic DNA Technique, Saliva/*microbiologyEnzymology
Pathogenicity11682174Phosphatidylinositol-specific phospholipase C activity in Lactobacillus rhamnosus with capacity to translocate.Rodriguez AV, Baigori MD, Alvarez S, Castro GR, Oliver GFEMS Microbiol Lett10.1111/j.1574-6968.2001.tb10858.x2001Animals, *Bacterial Translocation, Humans, Lactobacillus/*enzymology/genetics/isolation & purification/*physiology, Liver/microbiology, Mice, Mice, Inbred BALB C, Phosphatidylinositol Diacylglycerol-Lyase, Phosphoinositide Phospholipase C, *Probiotics, Random Amplified Polymorphic DNA Technique, Spleen/microbiology, Type C Phospholipases/*metabolismEnzymology
Phylogeny14607400Construction and use of a computerized DNA fingerprint database for lactic acid bacteria from silage.Chan RK, Wortman CR, Smiley BK, Hendrick CAJ Microbiol Methods10.1016/s0167-7012(03)00186-62003DNA Fingerprinting/*methods, DNA, Bacterial/chemistry/genetics/metabolism, *Databases, Nucleic Acid, Deoxyribonuclease EcoRI/metabolism, Electrophoresis, Agar Gel, Image Processing, Computer-Assisted, Lactobacillus/*classification/genetics, Phylogeny, Ribotyping, Silage/*microbiologyMetabolism
Metabolism15383715Glycerol metabolism of Lactobacillus rhamnosus ATCC 7469: cloning and expression of two glycerol kinase genes.Alvarez Mde F, Medina R, Pasteris SE, Strasser de Saad AM, Sesma FJ Mol Microbiol Biotechnol10.1159/0000798262004Acetates/metabolism, Adaptation, Physiological, Aerobiosis, Amino Acid Sequence, Bacterial Proteins/genetics/metabolism, Base Sequence, Cloning, Molecular, Conserved Sequence, DNA, Bacterial/chemistry/isolation & purification, Diacetyl/metabolism, Gene Expression Regulation, Bacterial, Genes, Bacterial, Glucose/analysis/metabolism, Glycerol/*metabolism, Glycerol Kinase/*genetics/*metabolism, Glycerolphosphate Dehydrogenase/genetics, Lactic Acid/metabolism, Lactobacillus/*enzymology/genetics/growth & development/metabolism, Molecular Sequence Data, Operon, Promoter Regions, Genetic, RNA, Bacterial/analysis, RNA, Messenger/analysis, Sequence Alignment, Sequence Analysis, DNAEnzymology
Metabolism15541791Immune responses in rainbow trout Oncorhynchus mykiss induced by a potential probiotic bacteria Lactobacillus rhamnosus JCM 1136.Panigrahi A, Kiron V, Kobayashi T, Puangkaew J, Satoh S, Sugita HVet Immunol Immunopathol10.1016/j.vetimm.2004.08.0062004Animal Nutritional Physiological Phenomena, Animals, Complement Activation/immunology, Immunoglobulins/blood, Intestines/microbiology, *Lactobacillus, Leukocytes/immunology, Muramidase/blood, Oncorhynchus mykiss/*immunology, Phagocytosis/immunology, Probiotics/*pharmacology, Stomach/microbiology, Superoxides/metabolism, Water Microbiology
Phylogeny15727832Bile salt and acid tolerance of Lactobacillus rhamnosus strains isolated from Parmigiano Reggiano cheese.Succi M, Tremonte P, Reale A, Sorrentino E, Grazia L, Pacifico S, Coppola RFEMS Microbiol Lett10.1016/j.femsle.2005.01.0372005Base Sequence, Bile Acids and Salts/*pharmacology, Cheese/*microbiology, DNA, Bacterial/genetics, *Food Microbiology, Hydrogen-Ion Concentration, Lactobacillus/*drug effects/genetics/*isolation & purification, Phenotype, *Probiotics, Random Amplified Polymorphic DNA TechniqueBiotechnology
Metabolism16213050Effects of yeasts and bacteria on the levels of folates in rye sourdoughs.Kariluoto S, Aittamaa M, Korhola M, Salovaara H, Vahteristo L, Piironen VInt J Food Microbiol10.1016/j.ijfoodmicro.2005.06.0132005Bread/microbiology, Coculture Techniques, Colony Count, Microbial, *Fermentation, Folic Acid/analysis/biosynthesis/*metabolism, Food Handling/methods, Food Microbiology, Lactobacillus/*metabolism, Secale/*microbiology, Yeasts/*metabolismBiotechnology
Stress17147441Effect of germination and thermal treatments on folates in rye.Kariluoto S, Liukkonen KH, Myllymaki O, Vahteristo L, Kaukovirta-Norja A, Piironen VJ Agric Food Chem10.1021/jf061734j2006Folic Acid/*analysis, Germination/*physiology, *Hot Temperature, Plant Roots/chemistry, Secale/*chemistry, Seeds/*chemistry
Pathogenicity21059159Protective effect of Lactobacillus casei strain Shirota against lethal infection with multi-drug resistant Salmonella enterica serovar Typhimurium DT104 in mice.Asahara T, Shimizu K, Takada T, Kado S, Yuki N, Morotomi M, Tanaka R, Nomoto KJ Appl Microbiol10.1111/j.1365-2672.2010.04884.x2010Acetic Acid/pharmacology, Animals, Disease Models, Animal, Drug Resistance, Multiple, Bacterial, Lactobacillus, *Lactobacillus casei, Male, Mice, Mice, Inbred BALB C, Probiotics/pharmacology/*therapeutic use, Salmonella Infections, Animal/pathology/*prevention & control, *Salmonella typhimurium/drug effects/growth & development
Phylogeny22021580Lactobacillus brantae sp. nov., isolated from faeces of Canada geese (Branta canadensis).Volokhov DV, Amselle M, Beck BJ, Popham DL, Whittaker P, Wang H, Kerrigan E, Chizhikov VEInt J Syst Evol Microbiol10.1099/ijs.0.033852-02011Animals, Bacterial Typing Techniques, Base Composition, Carbohydrates/analysis, DNA, Bacterial/genetics, DNA, Ribosomal Spacer/genetics, Fatty Acids/analysis, Feces/microbiology, Geese/*microbiology, Genes, Bacterial, Genotype, Lactobacillus/*classification/genetics/isolation & purification, Molecular Sequence Data, Phenotype, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Species SpecificityGenetics
Metabolism23107725Effect of different fermentation parameters on L-lactic acid production from liquid distillery stillage.Djukic-Vukovic AP, Mojovic LV, Vukasinovic-Sekulic MS, Rakin MB, Nikolic SB, Pejin JD, Bulatovic MLFood Chem10.1016/j.foodchem.2012.03.0112012Animal Feed/*analysis/microbiology, Biomass, Culture Media/chemistry/metabolism, Fermentation, Hydrogen-Ion Concentration, Industrial Microbiology/*methods, Lactic Acid/*metabolism, Lactobacillus rhamnosus/*metabolism, Temperature, Waste Disposal, Fluid/*methodsBiotechnology
Biotechnology23114502Integrated production of lactic acid and biomass on distillery stillage.Djukic-Vukovic AP, Mojovic LV, Vukasinovic-Sekulic MS, Nikolic SB, Pejin JDBioprocess Biosyst Eng10.1007/s00449-012-0842-x2012*Biomass, Lactic Acid/*biosynthesis, Lactobacillus rhamnosus/*growth & development, Time Factors
Metabolism23186681Lactic acid production on liquid distillery stillage by Lactobacillus rhamnosus immobilized onto zeolite.Djukic-Vukovic AP, Mojovic LV, Jokic BM, Nikolic SB, Pejin JDBioresour Technol10.1016/j.biortech.2012.10.0662012Batch Cell Culture Techniques, Carbohydrate Metabolism, Cells, Immobilized/cytology/metabolism, Colony Count, Microbial, *Distillation, Fermentation, Industrial Waste/*analysis, Lactic Acid/*biosynthesis, Lactobacillus rhamnosus/*cytology/*metabolism, Microbial Viability, Zeolites/*chemistryBiotechnology
Metabolism23332852Antimicrobial potential for the combination of bovine lactoferrin or its hydrolysate with lactoferrin-resistant probiotics against foodborne pathogens.Chen PW, Jheng TT, Shyu CL, Mao FCJ Dairy Sci10.3168/jds.2012-61122013Animals, Anti-Infective Agents/administration & dosage/*therapeutic use, Bifidobacterium/metabolism, Cattle, Enterococcus faecalis/drug effects, Escherichia coli/drug effects, Lactobacillus/metabolism, Lactobacillus acidophilus/metabolism, Lactobacillus rhamnosus/metabolism, Lactoferrin/administration & dosage/drug effects/*therapeutic use, Pediococcus/metabolism, Probiotics/administration & dosage/*therapeutic use, Protein Hydrolysates, Salmonella typhimurium/drug effectsPathogenicity
Biotechnology24389928Dose-dependent effects of Lactobacillus rhamnosus on serum interleukin-17 production and intestinal T-cell responses in pigs challenged with Escherichia coli.Zhu YH, Li XQ, Zhang W, Zhou D, Liu HY, Wang JFAppl Environ Microbiol10.1128/AEM.03668-132014Animals, Blood/immunology, Enterotoxigenic Escherichia coli/*immunology, Immunologic Factors/*administration & dosage, Interleukin-17/*blood, Intestinal Mucosa/*immunology, Lactobacillus rhamnosus/*immunology, Probiotics/*administration & dosage, Swine, T-Lymphocyte Subsets/*immunology
Metabolism24438190Shelf life stability of lactobacilli encapsulated in raspberry powder: insights into non-dairy probiotics.Anekella K, Orsat VInt J Food Sci Nutr10.3109/09637486.2013.8697932014Anti-Bacterial Agents/pharmacology, Beverages/analysis/*microbiology, Bile Acids and Salts/metabolism, Colony Count, Microbial, Disk Diffusion Antimicrobial Tests, Drug Resistance, Multiple, Bacterial, Food Additives/chemistry, Food Storage, Food Technology, Food, Preserved/analysis/*microbiology, Fruit/*chemistry, Hydrogen-Ion Concentration, Lactobacillus acidophilus/drug effects/*growth & development/isolation & purification/metabolism, Lactobacillus rhamnosus/drug effects/*growth & development/isolation & purification/metabolism, Microbial Viability, Particle Size, Polysaccharides/chemistry, Probiotics/*chemistry, Refrigeration, Rubus/*chemistryEnzymology
Pathogenicity25269603The potential hazards of Aspergillus sp. in foods and feeds, and the role of biological treatment: a review.Sheikh-Ali SI, Ahmad A, Mohd-Setapar SH, Zakaria ZA, Abdul-Talib N, Khamis AK, Hoque MEJ Microbiol10.1007/s12275-014-4294-72014Animals, Aspergillus flavus/*growth & development/metabolism, Food Contamination/*prevention & control, *Food Microbiology, Food Safety, Humans, Lactobacillus rhamnosus/growth & development/*physiology, *Microbial Interactions, Mycotoxins/metabolism, Pest Control, Biological/*methods, Saccharomyces cerevisiae/growth & development/*physiologyMetabolism
Metabolism25915861A Selected Lactobacillus rhamnosus Strain Promotes EGFR-Independent Akt Activation in an Enterotoxigenic Escherichia coli K88-Infected IPEC-J2 Cell Model.Zhang W, Zhu YH, Yang JC, Yang GY, Zhou D, Wang JFPLoS One10.1371/journal.pone.01257172015Animals, Apoptosis/physiology, Bacterial Adhesion/physiology, Blotting, Western, Cell Line, Enterotoxigenic Escherichia coli/*metabolism, Epidermal Growth Factor/*physiology, Escherichia coli Infections/*metabolism/physiopathology, Intestinal Mucosa/metabolism/microbiology/*physiopathology, Lactobacillus rhamnosus/*metabolism, Mucins/metabolism, Nod2 Signaling Adaptor Protein/physiology, Oncogene Protein v-akt/*physiology, Real-Time Polymerase Chain Reaction, Swine, Toll-Like Receptor 4/physiology, Tumor Necrosis Factor-alpha/physiologyPathogenicity
Biotechnology26639411Wastes from bioethanol and beer productions as substrates for l(+) lactic acid production - A comparative study.Djukic-Vukovic A, Mladenovic D, Radosavljevic M, Kocic-Tanackov S, Pejin J, Mojovic LWaste Manag10.1016/j.wasman.2015.11.0312015Beer, *Biofuels, Biomass, Bread, Carbohydrates/chemistry, Edible Grain/*chemistry, Fermentation, Food Industry/*methods, Garbage, Hydrogen-Ion Concentration, Industrial Waste, Lactic Acid/*chemistry, Lactobacillus rhamnosus, Nitrogen/chemistry, *Refuse Disposal, Solanum tuberosum, Temperature, Waste Water
Metabolism26649329Live and Heat-Killed Lactobacillus rhamnosus ATCC 7469 May Induce Modulatory Cytokines Profiles on Macrophages RAW 264.7.Jorjao AL, de Oliveira FE, Leao MV, Carvalho CA, Jorge AO, de Oliveira LDScientificWorldJournal10.1155/2015/7167492015Animals, Cell Line, Cytokines/*metabolism, Lactobacillus rhamnosus/*pathogenicity, Macrophages/drug effects/metabolism/*microbiology, Mice, Probiotics/*pharmacologyPathogenicity
Enzymology27606962Lactobacillus is able to alter the virulence and the sensitivity profile of Candida albicans.Oliveira VM, Santos SS, Silva CR, Jorge AO, Leao MVJ Appl Microbiol10.1111/jam.132892016Antifungal Agents/pharmacology, Biofilms/growth & development, Candida albicans/*drug effects/isolation & purification/*pathogenicity/physiology, Lactobacillus rhamnosus/*physiology, Microbial Interactions, Virulence Factors/metabolismPhylogeny
Pathogenicity27982224Dentifrice Containing Extract of Rosmarinus officinalis Linn.: An Antimicrobial Evaluation.Valones MA, Higino JS, Souza PR, Crovella S, Caldas AF Junior, Carvalho AABraz Dent J10.1590/0103-64402016006722016Anti-Infective Agents/*pharmacology, *Dentifrices, Humans, Microbial Sensitivity Tests, Plant Extracts/*pharmacology, Rosmarinus/*chemistry
Pathogenicity28554134Lactobacillus rhamnosus ATCC 7469 exopolysaccharides synergizes with low level ionizing radiation to modulate signaling molecular targets in colorectal carcinogenesis in rats.Zahran WE, Elsonbaty SM, Moawed FSMBiomed Pharmacother10.1016/j.biopha.2017.05.0892017Animals, Carcinogenesis/*drug effects/*radiation effects, Colorectal Neoplasms/metabolism/pathology/*therapy, Combined Modality Therapy/methods, *Lactobacillus rhamnosus, Male, Polysaccharides, Bacterial/pharmacology/*therapeutic use, *Radiation, Ionizing, Rats, Signal Transduction/drug effects/radiation effectsMetabolism
Cultivation28659890Pre-cultivation with Selected Prebiotics Enhances the Survival and the Stress Response of Lactobacillus rhamnosus Strains in Simulated Gastrointestinal Transit.Succi M, Tremonte P, Pannella G, Tipaldi L, Cozzolino A, Romaniello R, Sorrentino E, Coppola RFront Microbiol10.3389/fmicb.2017.010672017Stress
Metabolism29177947Effect of Lactobacillus rhamnosus on the response of Galleria mellonella against Staphylococcus aureus and Escherichia coli infections.Jorjao AL, de Oliveira FE, Leao MVP, Jorge AOC, de Oliveira LDArch Microbiol10.1007/s00203-017-1441-72017Animals, Escherichia coli/*immunology/physiology, Hemolymph/metabolism, Host-Pathogen Interactions, Lactobacillus rhamnosus/*immunology, Larva/immunology/microbiology, Moths/*immunology/microbiology, Probiotics, Staphylococcus aureus/*immunology/physiologyPathogenicity
Pathogenicity29243027Lactobacillus rhamnosus reduces parasite load on Toxocara canis experimental infection in mice, but has no effect on the parasite in vitro.Walcher DL, Cruz LAX, de Lima Telmo P, Martins LHR, da Costa de Avila LF, Berne MEA, Scaini CJParasitol Res10.1007/s00436-017-5712-72017Animals, Humans, Lactobacillus rhamnosus/*physiology, Larva/drug effects, Mice, Mice, Inbred BALB C, Parasite Load, Probiotics/*administration & dosage, Toxocara canis/*drug effects/microbiology/physiology, Toxocariasis/*drug therapy/parasitology, Zoonoses/drug therapy/parasitology
Metabolism29330879Biotechnological conversion of spent coffee grounds into lactic acid.Hudeckova H, Neureiter M, Obruca S, Fruhauf S, Marova ILett Appl Microbiol10.1111/lam.128492018Bacillus coagulans/enzymology/metabolism, Bioreactors/*microbiology, Biotechnology, Cellulase/*metabolism, Coffee/chemistry/*metabolism, Fermentation, Hydrolysis, Lactic Acid/*biosynthesis, Lactobacillus rhamnosus/enzymology/metabolism, Refuse Disposal/*methods, Solid WasteEnzymology
Genetics29449386Draft Genome Sequence of Lactobacillus rhamnosus NRRL B-442, a Potential Probiotic Strain.Muyyarikkandy MS, Alqahtani FH, Mandoiu I, Amalaradjou MAGenome Announc10.1128/genomeA.00046-182018
Pathogenicity29550602Effects of dietary Lactobacillus rhamnosus JCM1136 and Lactococcus lactis subsp. lactis JCM5805 on the growth, intestinal microbiota, morphology, immune response and disease resistance of juvenile Nile tilapia, Oreochromis niloticus.Xia Y, Lu M, Chen G, Cao J, Gao F, Wang M, Liu Z, Zhang D, Zhu H, Yi MFish Shellfish Immunol10.1016/j.fsi.2018.03.0202018Animal Feed/analysis, Animals, Cichlids/anatomy & histology/growth & development/*immunology/microbiology, Diet/veterinary, Gastrointestinal Microbiome/*drug effects, Intestines/drug effects/microbiology, Lactobacillus rhamnosus/*chemistry, Lactococcus lactis/*chemistry, Probiotics/*pharmacology, Random Allocation
Metabolism29633638Lipoteichoic acids are embedded in cell walls during logarithmic phase, but exposed on membrane vesicles in Lactobacillus gasseri JCM 1131(T).Shiraishi T, Yokota S, Sato Y, Ito T, Fukiya S, Yamamoto S, Sato T, Yokota ABenef Microbes10.3920/BM2017.01242018Antibodies, Monoclonal/metabolism, Antigens, Surface/*metabolism, Cell Membrane/chemistry/*metabolism/ultrastructure, Cell Wall/chemistry/*metabolism, Lactobacillus fermentum, Lactobacillus gasseri/chemistry/growth & development/*physiology/ultrastructure, Lactobacillus rhamnosus, Lipopolysaccharides/*metabolism, Probiotics, Protein Binding, Teichoic Acids/*metabolism
29881432Promoting Probiotics Survival by Microencapsualtion with Hylon Starch and Genipin Cross-linked Coatings in Simulated Gastro-intestinal Condition and Heat Treatment.Khosravi Zanjani MA, Ehsani MR, Ghiassi Tarzi B, Sharifan AIran J Pharm Res2018
Metabolism30778645Utilization of brewing and malting by-products as carrier and raw materials in l-(+)-lactic acid production and feed application.Radosavljevic M, Pejin J, Pribic M, Kocic-Tanackov S, Romanic R, Mladenovic D, Djukic-Vukovic A, Mojovic LAppl Microbiol Biotechnol10.1007/s00253-019-09683-52019Animal Feed/*analysis, Cells, Immobilized, Edible Grain/metabolism, *Fermentation, Hydrolysis, Lactic Acid/*biosynthesis, Lactobacillus rhamnosus/metabolism, Lecithins/metabolism, Microbial Viability, *Probiotics, Protein Hydrolysates, Saccharomyces cerevisiae/metabolismBiotechnology
30820202Lactobacillus rhamnosus biosurfactant inhibits biofilm formation and gene expression of caries-inducing Streptococcus mutans.Tahmourespour A, Kasra-Kermanshahi R, Salehi RDent Res J (Isfahan)2019
30949947Non-thermal plasma and ultrasound-assisted open lactic acid fermentation of distillery stillage.Djukic-Vukovic A, Lazovic S, Mladenovic D, Knezevic-Jugovic Z, Pejin J, Mojovic LEnviron Sci Pollut Res Int10.1007/s11356-019-04894-92019Fermentation, Lactic Acid, Lactobacillus rhamnosus, Ultrasonics, Waste Disposal, Fluid/*methods
Metabolism31605205Immobilization of Lactobacillus rhamnosus in polyvinyl alcohol/calcium alginate matrix for production of lactic acid.Radosavljevic M, Levic S, Belovic M, Pejin J, Djukic-Vukovic A, Mojovic L, Nedovic VBioprocess Biosyst Eng10.1007/s00449-019-02228-02019Alginates/*chemistry, Cells, Immobilized/*metabolism, Lactic Acid/*biosynthesis, Lactobacillus rhamnosus/*metabolism, Polyvinyl Alcohol/*chemistryBiotechnology
Metabolism31902869Growth Response of Lactobacillus rhamnosus Chloramphenicol-Resistant Strain ATCC 27773 to Pteroyl-Mono- and -Di-Glutamates.Koseki K, Okamoto N, Bito T, Ebara S, Yabuta Y, Watanabe FJ Nutr Sci Vitaminol (Tokyo)10.3177/jnsv.65.5452019Animals, Chickens, Chloramphenicol/pharmacology, Drug Resistance, Bacterial, Folic Acid/*analysis, *Food Analysis/methods/standards, *Lactobacillus rhamnosus/drug effects/physiology, *Pteroylpolyglutamic Acids/metabolism/pharmacology, gamma-Glutamyl Hydrolase/metabolismPathogenicity
Pathogenicity32114169Rheological properties of a neutral polysaccharide extracted from maca (Lepidium meyenii Walp.) roots with prebiotic and anti-inflammatory activities.Lee YK, Jung SK, Chang YHInt J Biol Macromol10.1016/j.ijbiomac.2020.02.3072020Animals, Anti-Inflammatory Agents/*chemistry, Cell Line, Hydrogen Bonding, Lepidium/*chemistry, Mice, Molecular Weight, Plant Extracts/*chemistry, Plant Roots/*chemistry, Polysaccharides/*chemistry, Prebiotics, RAW 264.7 Cells, Rheology/methods, Viscosity/drug effects
Pathogenicity32246325Effects of Lactobacillus rhamnosus ATCC 7469 on Different Parameters Related to Health Status of Rainbow Trout (Oncorhynchus mykiss) and the Protection Against Yersinia ruckeri.Hooshyar Y, Abedian Kenari A, Paknejad H, Gandomi HProbiotics Antimicrob Proteins10.1007/s12602-020-09645-82020Alginates/chemistry, Animal Feed/analysis, Animals, Body Composition/drug effects, Catalase/genetics/immunology, Cell Encapsulation/methods, Cells, Immobilized, Chitosan/chemistry, Cholesterol/blood, Complement Pathway, Alternative/drug effects, Diet, Disease Resistance/drug effects/genetics/immunology, Fish Diseases/immunology/microbiology/*therapy, Fish Proteins/*genetics/immunology, Gene Expression Regulation/*drug effects/immunology, Interleukin-1/genetics/immunology, Lactobacillus rhamnosus/*physiology, Muramidase/genetics/immunology, Oncorhynchus mykiss/growth & development/*immunology/microbiology, Probiotics/*pharmacology, Superoxide Dismutase/genetics/immunology, Tumor Necrosis Factor-alpha/genetics/immunology, Weight Gain/drug effects, Yersinia Infections/immunology/microbiology/*therapy, Yersinia ruckeri/drug effects/growth & development/pathogenicity
34058894Microencapsulation of Lactobacillus rhamnosus ATCC 7469 by spray drying using maltodextrin, whey protein concentrate and trehalose.Agudelo-Chaparro J, Ciro-Velasquez HJ, Sepulveda-Valencia JU, Perez-Monterroza EJFood Sci Technol Int10.1177/108201322110206212021
34738887Cell-free supernatants produced by lactic acid bacteria reduce Salmonella population in vitro.Evangelista AG, Correa JAF, Dos Santos JVG, Matte EHC, Milek MM, Biauki GC, Costa LB, Luciano FBMicrobiology (Reading)10.1099/mic.0.0011022021Animals, *Lactobacillales, Lactobacillus, *Probiotics/pharmacology, Salmonella, *Salmonella Infections, Animal/microbiology, Swine
Pathogenicity34975786A Rapid Screening Method of Candidate Probiotics for Inflammatory Bowel Diseases and the Anti-inflammatory Effect of the Selected Strain Bacillus smithii XY1.Huang X, Ai F, Ji C, Tu P, Gao Y, Wu Y, Yan F, Yu TFront Microbiol10.3389/fmicb.2021.7603852021
35327279Antifreeze Peptides Preparation from Tilapia Skin and Evaluation of Its Cryoprotective Effect on Lacticaseibacillus rhamnosus.Zeng Y, Li W, Liu Y, Jiang WFoods10.3390/foods110608572022
Metabolism35566118Preparation, Characterization, and Mechanism of Antifreeze Peptides from Defatted Antarctic Krill (Euphausia superba) on Lactobacillus rhamnosus.Liu Y, Yu X, Zhu Y, Yang W, Zeng Y, Hu Y, Jiang WMolecules10.3390/molecules270927712022Amino Acids/metabolism, Animals, Antifreeze Proteins/metabolism, *Euphausiacea/chemistry, *Lactobacillus rhamnosus, Peptides/metabolism/pharmacology
Biotechnology35679945Direct lactic acid production from household food waste by lactic acid bacteria.Song L, Liu S, Liu R, Yang D, Dai XSci Total Environ10.1016/j.scitotenv.2022.1564792022

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8433Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 20021)https://www.dsmz.de/collection/catalogue/details/culture/DSM-20021
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
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41838Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/10119
47413Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 21452)https://www.ccug.se/strain?id=21452
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68371Automatically annotated from API 50CH acid
68374Automatically annotated from API ID32E
68379Automatically annotated from API Coryne
68381Automatically annotated from API rID32STR