Strain identifier
BacDive ID: 628
Type strain:
Species: Bacillus cereus
Strain history: IAM 1656 <-- S. Osawa <-- Chantreune.
NCBI tax ID(s): 526980 (strain), 1396 (species)
General
@ref: 3561
BacDive-ID: 628
DSM-Number: 9378
keywords: genome sequence, Bacteria, spore-forming, mesophilic, motile
description: Bacillus cereus DSM 9378 is a spore-forming, mesophilic, motile bacterium that was isolated from contaminated flask.
NCBI tax id
NCBI tax id | Matching level |
---|---|
526980 | strain |
1396 | species |
strain history
@ref | history |
---|---|
3561 | <- ATCC <- NRRL |
67770 | IAM 1656 <-- S. Osawa <-- Chantreune. |
doi: 10.13145/bacdive628.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus cereus
- full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)
@ref: 3561
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus cereus
full scientific name: Bacillus cereus Frankland and Frankland 1887
type strain: no
Morphology
cell morphology
@ref | motility | confidence | gram stain |
---|---|---|---|
69480 | yes | 94.686 | |
69480 | 100 | positive |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
3561 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
3561 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://mediadive.dsmz.de/medium/1 | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
3561 | positive | growth | 30 | mesophilic |
67770 | positive | growth | 30 | mesophilic |
Physiology and metabolism
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | yes | 100 |
69480 | yes | 100 |
metabolite utilization
@ref | metabolite | utilization activity | kind of utilization tested | Chebi-ID |
---|---|---|---|---|
68371 | Potassium 5-ketogluconate | - | builds acid from | |
68371 | Potassium 2-ketogluconate | - | builds acid from | |
68371 | gluconate | - | builds acid from | 24265 |
68371 | L-arabitol | - | builds acid from | 18403 |
68371 | D-arabitol | - | builds acid from | 18333 |
68371 | L-fucose | - | builds acid from | 18287 |
68371 | D-fucose | - | builds acid from | 28847 |
68371 | D-tagatose | - | builds acid from | 16443 |
68371 | D-lyxose | - | builds acid from | 62318 |
68371 | turanose | - | builds acid from | 32528 |
68371 | gentiobiose | - | builds acid from | 28066 |
68371 | xylitol | - | builds acid from | 17151 |
68371 | glycogen | + | builds acid from | 28087 |
68371 | starch | + | builds acid from | 28017 |
68371 | raffinose | - | builds acid from | 16634 |
68371 | melezitose | - | builds acid from | 6731 |
68371 | inulin | - | builds acid from | 15443 |
68371 | trehalose | + | builds acid from | 27082 |
68371 | sucrose | + | builds acid from | 17992 |
68371 | melibiose | - | builds acid from | 28053 |
68371 | lactose | - | builds acid from | 17716 |
68371 | maltose | + | builds acid from | 17306 |
68371 | cellobiose | + | builds acid from | 17057 |
68371 | salicin | + | builds acid from | 17814 |
68371 | esculin | + | builds acid from | 4853 |
68371 | arbutin | + | builds acid from | 18305 |
68371 | amygdalin | - | builds acid from | 27613 |
68371 | N-acetylglucosamine | + | builds acid from | 59640 |
68371 | methyl alpha-D-glucopyranoside | - | builds acid from | 320061 |
68371 | methyl alpha-D-mannoside | - | builds acid from | 43943 |
68371 | D-sorbitol | - | builds acid from | 17924 |
68371 | D-mannitol | - | builds acid from | 16899 |
68371 | myo-inositol | - | builds acid from | 17268 |
68371 | galactitol | - | builds acid from | 16813 |
68371 | L-rhamnose | - | builds acid from | 62345 |
68371 | L-sorbose | - | builds acid from | 17266 |
68371 | D-mannose | - | builds acid from | 16024 |
68371 | D-fructose | + | builds acid from | 15824 |
68371 | D-glucose | + | builds acid from | 17634 |
68371 | D-galactose | - | builds acid from | 12936 |
68371 | methyl beta-D-xylopyranoside | - | builds acid from | 74863 |
68371 | ribitol | - | builds acid from | 15963 |
68371 | L-xylose | - | builds acid from | 65328 |
68371 | D-xylose | - | builds acid from | 65327 |
68371 | D-ribose | + | builds acid from | 16988 |
68371 | L-arabinose | - | builds acid from | 30849 |
68371 | D-arabinose | - | builds acid from | 17108 |
68371 | erythritol | - | builds acid from | 17113 |
68371 | glycerol | - | builds acid from | 17754 |
API 50CHac
@ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
53496 | - | - | - | - | - | + | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | + | - | + | + | + | + | + | - | - | + | + | - | - | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type |
---|---|
3561 | contaminated flask |
53496 | Contaminated flask |
67770 | Contaminated flask |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Contamination | |
#Engineered | #Industrial | #Engineered product |
Safety information
risk assessment
- @ref: 3561
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Bacillus cereus NCTC7464 | GCA_900445375 | contig | ncbi | 1396 |
66792 | Bacillus cereus ATCC 10876 | GCA_000743815 | scaffold | ncbi | 526980 |
66792 | Bacillus cereus ATCC 10876 | 526980.4 | wgs | patric | 526980 |
66792 | Bacillus cereus ATCC 10876 | 526980.3 | wgs | patric | 526980 |
66792 | Bacillus cereus strain NCTC7464 | 1396.2222 | wgs | patric | 1396 |
66792 | Bacillus cereus ATCC 10876 | 643886035 | draft | img | 526980 |
66792 | Bacillus cereus ATCC 10876 | 2609460101 | draft | img | 526980 |
67770 | Bacillus cereus ATCC 10876 | GCA_000160895 | chromosome | ncbi | 526980 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | yes | 100 | no |
motile | yes | 64.888 | no |
flagellated | yes | 71.898 | no |
gram-positive | yes | 89.76 | no |
anaerobic | no | 98.269 | no |
aerobic | yes | 77.31 | no |
halophile | no | 93.754 | no |
spore-forming | yes | 93.541 | no |
thermophile | no | 99.589 | yes |
glucose-util | yes | 88.93 | no |
glucose-ferment | no | 91.047 | no |
External links
@ref: 3561
culture collection no.: DSM 9378, ATCC 10876, NRRL B-569, CCUG 36925, JCM 20240, CECT 131, IAM 1656, KCTC 1092, KCTC 1526, NCIMB 8579, NCTC 7464
straininfo link
- @ref: 70303
- straininfo: 35299
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Enzymology | 9852021 | Role of the gerI operon of Bacillus cereus 569 in the response of spores to germinants. | Clements MO, Moir A | J Bacteriol | 10.1128/JB.180.24.6729-6735.1998 | 1998 | Adenosine/pharmacology, Alanine/pharmacology, Amino Acid Sequence, Bacillus cereus/drug effects/*genetics/*physiology, Base Sequence, Cloning, Molecular, DNA, Bacterial, *Genes, Bacterial, Guanosine/pharmacology, Inosine/pharmacology, Molecular Sequence Data, *Operon, Sequence Analysis, DNA, Spores, Bacterial | Genetics |
Biotechnology | 10475957 | Characterization of the exosporium of Bacillus cereus. | Charlton S, Moir AJ, Baillie L, Moir A | J Appl Microbiol | 10.1046/j.1365-2672.1999.00878.x | 1999 | Bacillus cereus/*physiology, Food Microbiology, Soil Microbiology, *Spores, Bacterial/chemistry/physiology/ultrastructure | |
Metabolism | 11133940 | GerN, an antiporter homologue important in germination of Bacillus cereus endospores. | Thackray PD, Behravan J, Southworth TW, Moir A | J Bacteriol | 10.1128/JB.183.2.476-482.2001 | 2001 | 2S Albumins, Plant, Alanine/metabolism, Amino Acid Sequence, Antiporters/*genetics/metabolism, Bacillus cereus/*physiology/ultrastructure, Bacterial Proteins/*genetics/metabolism, Biological Transport, Inosine/*metabolism, Membrane Proteins/genetics, Molecular Sequence Data, Mutagenesis, Picolinic Acids/metabolism, Plant Proteins/genetics, Sequence Homology, Amino Acid, Spores, Bacterial | Genetics |
Pathogenicity | 11872505 | Inhibition of bacterial growth, enterotoxin production, and spore outgrowth in strains of Bacillus cereus by bacteriocin AS-48. | Abriouel H, Maqueda M, Galvez A, Martinez-Bueno M, Valdivia E | Appl Environ Microbiol | 10.1128/AEM.68.3.1473-1477.2002 | 2002 | Anti-Bacterial Agents/*pharmacology, Bacillus cereus/*drug effects/*growth & development/metabolism, *Bacterial Proteins, Culture Media, Enterotoxins/*biosynthesis, *Peptides, Spores, Bacterial/drug effects/growth & development | Cultivation |
Pathogenicity | 12101297 | Germination of Bacillus cereus spores in response to L-alanine and to inosine: the roles of gerL and gerQ operons. | Barlass PJ, Houston CW, Clements MO, Moir A | Microbiology (Reading) | 10.1099/00221287-148-7-2089 | 2002 | Alanine/*pharmacology, Amino Acid Sequence, Bacillus cereus/*drug effects/*physiology, Bacterial Proteins/chemistry/genetics/*metabolism, Base Sequence, Cloning, Molecular, DNA Transposable Elements, Inosine/*pharmacology, Molecular Sequence Data, Mutagenesis, Insertional, *Operon, Sequence Analysis, DNA, Spores, Bacterial/drug effects/physiology | Enzymology |
Metabolism | 12754235 | Genes of Bacillus cereus and Bacillus anthracis encoding proteins of the exosporium. | Todd SJ, Moir AJ, Johnson MJ, Moir A | J Bacteriol | 10.1128/JB.185.11.3373-3378.2003 | 2003 | Amino Acid Sequence, Bacillus anthracis/*genetics/growth & development/metabolism, Bacillus cereus/*genetics/growth & development/metabolism, Bacterial Proteins/chemistry/*genetics/metabolism, *Genes, Bacterial, Molecular Sequence Data, Multigene Family, Sequence Analysis, DNA, Spores, Bacterial/*genetics/growth & development/metabolism | Genetics |
Metabolism | 14665737 | Asymmetric reduction of benzil to (S)-benzoin with whole cells of Bacillus cereus. | Saito T, Maruyama R, Ono S, Yasukawa N, Kodaira K, Nishizawa M, Ito S, Inoue M | Appl Biochem Biotechnol | 10.1385/abab:111:3:185 | 2003 | Bacillus cereus/*enzymology/genetics, Benzoin/*chemistry/metabolism, Buffers, Culture Media, Glucose/pharmacology, Hydrogen-Ion Concentration, Oxidation-Reduction, Phenylglyoxal/*analogs & derivatives/*chemistry/metabolism, Stereoisomerism, Temperature, Time Factors | Cultivation |
Metabolism | 15901704 | The ExsA protein of Bacillus cereus is required for assembly of coat and exosporium onto the spore surface. | Bailey-Smith K, Todd SJ, Southworth TW, Proctor J, Moir A | J Bacteriol | 10.1128/JB.187.11.3800-3806.2005 | 2005 | Amino Acid Sequence, Bacillus cereus/*genetics/growth & development/*metabolism, Bacterial Proteins/genetics/*metabolism, DNA Transposable Elements, DNA-Binding Proteins/genetics/*metabolism, Detergents/pharmacology, Gene Expression Regulation, Bacterial, Genes, Reporter, Microscopy, Electron, Molecular Sequence Data, Mutation, Salts/pharmacology, Spores, Bacterial/*genetics/*metabolism/ultrastructure, Trans-Activators/genetics/*metabolism | Genetics |
Phylogeny | 16943000 | The use of Fourier transform infrared spectroscopy to differentiate Escherichia coli O157:H7 from other bacteria inoculated into apple juice. | Al-Holy MA, Lin M, Cavinato AG, Rasco BA | Food Microbiol | 10.1016/j.fm.2005.01.017 | 2006 | *Beverages/analysis/microbiology, Escherichia coli O157/classification/*isolation & purification, Food Contamination/*analysis, Food Microbiology, Malus/*microbiology, Principal Component Analysis, Sensitivity and Specificity, Species Specificity, Spectroscopy, Fourier Transform Infrared/*methods | Biotechnology |
Metabolism | 18641133 | The Bacillus cereus GerN and GerT protein homologs have distinct roles in spore germination and outgrowth, respectively. | Senior A, Moir A | J Bacteriol | 10.1128/JB.00789-08 | 2008 | Antiporters/genetics/*metabolism, Bacillus cereus/genetics/growth & development/*physiology, Bacterial Proteins/genetics/*metabolism, Hydrogen-Ion Concentration, Inosine/metabolism, Molecular Sequence Data, Mutation, Salts/metabolism, Sodium/metabolism, Spores, Bacterial/genetics/growth & development/*physiology | Genetics |
Phylogeny | 19323730 | Anthocyanins, antioxidative, and antimicrobial properties of American cranberry (Vaccinium macrocarpon Ait.) and their press cakes. | Viskelis P, Rubinskiene M, Jasutiene I, Sarkinas A, Daubaras R, Cesoniene L | J Food Sci | 10.1111/j.1750-3841.2009.01066.x | 2009 | Anthocyanins/*analysis, Anti-Bacterial Agents/analysis/pharmacology, Antioxidants/*analysis, Chromatography, High Pressure Liquid, Free Radical Scavengers/analysis, Lithuania, Mass Spectrometry, Microbial Sensitivity Tests, Phenols/analysis, Plant Structures/chemistry, Species Specificity, Spectrophotometry, Ultraviolet, United States, Vaccinium macrocarpon/*chemistry | |
Pathogenicity | 22133067 | Quality parameters and antioxidant and antibacterial properties of some Mexican honeys. | Rodriguez BA, Mendoza S, Iturriga MH, Castano-Tostado E | J Food Sci | 10.1111/j.1750-3841.2011.02487.x | 2011 | Anti-Bacterial Agents/*chemistry/*pharmacology, Antioxidants/*analysis/chemistry, Bacillus cereus/drug effects/growth & development, Biological Products/*chemistry/*pharmacology, Color, Honey/*analysis, Hydrogen-Ion Concentration, Kinetics, Listeria monocytogenes/drug effects/growth & development, Mexico, Microbial Sensitivity Tests, Phenols/analysis, Proline/analysis, Quality Control, Regression Analysis, Reproducibility of Results, Salmonella typhimurium/drug effects/growth & development, Staphylococcus aureus/drug effects/growth & development, Water/analysis | Enzymology |
Stress | 22225985 | A comparison of the effects of E-beam irradiation and heat treatment on the variability of Bacillus cereus inactivation and lag phase duration of surviving cells. | Aguirre JS, Ordonez JA, Garcia de Fernando GD | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2011.12.012 | 2011 | Bacillus cereus/*growth & development/physiology/radiation effects, Electrons, *Food Irradiation, Hot Temperature, *Microbial Viability, Spores, Bacterial/growth & development/radiation effects, Time Factors | |
Enzymology | 23181593 | Antibacterial, antifungal and antioxidant activities of the ethanol extract of the stem bark of Clausena heptaphylla. | Fakruddin M, Mannan KS, Mazumdar RM, Afroz H | BMC Complement Altern Med | 10.1186/1472-6882-12-232 | 2012 | Anti-Bacterial Agents/chemistry/isolation & purification/*pharmacology, Antifungal Agents/chemistry/isolation & purification/*pharmacology, Antioxidants/chemistry/isolation & purification/*pharmacology, Bacteria/drug effects, Clausena/*chemistry, Fungi/drug effects, Microbial Sensitivity Tests, Plant Bark/*chemistry, Plant Extracts/chemistry/isolation & purification/*pharmacology | Phylogeny |
Metabolism | 24204713 | The Bacillus cereus Hbl and Nhe tripartite enterotoxin components assemble sequentially on the surface of target cells and are not interchangeable. | Sastalla I, Fattah R, Coppage N, Nandy P, Crown D, Pomerantsev AP, Leppla SH | PLoS One | 10.1371/journal.pone.0076955 | 2013 | ATP-Binding Cassette Transporters/genetics/metabolism/pharmacology, Animals, Bacillus cereus/genetics/*metabolism, Bacterial Proteins/genetics/*metabolism/pharmacology, CHO Cells, Cell Line, Cell Line, Tumor, Cell Membrane/metabolism, Cell Survival/drug effects, Cells, Cultured, Cricetinae, Cricetulus, Culture Media, Conditioned/pharmacology, Enterotoxins/genetics/*metabolism/pharmacology, Gene Dosage, Gene Order, Genetic Complementation Test, Hemolysin Proteins/genetics/metabolism/pharmacology, Humans, Macrophages/drug effects/metabolism/microbiology, Mice, Mice, Inbred BALB C, Mice, Inbred DBA, Microscopy, Confocal, Mutation, Protein Binding | Pathogenicity |
Enzymology | 24402202 | Trifolium pratense L. as a potential natural antioxidant. | Vlaisavljevic S, Kaurinovic B, Popovic M, Djurendic-Brenesel M, Vasiljevic B, Cvetkovic D, Vasiljevic S | Molecules | 10.3390/molecules19010713 | 2014 | Anti-Bacterial Agents/chemistry/isolation & purification/pharmacology, Bacillus cereus/drug effects, Biphenyl Compounds/chemistry, Escherichia coli/drug effects, Free Radical Scavengers/*chemistry/isolation & purification/pharmacology, Gas Chromatography-Mass Spectrometry, Liposomes/chemistry, Microbial Sensitivity Tests, Nitric Oxide/chemistry, Oils, Volatile/chemistry/isolation & purification/pharmacology, Oxidation-Reduction, Picrates/chemistry, Plant Oils/*chemistry/isolation & purification/pharmacology, Salmonella typhimurium/drug effects, Staphylococcus aureus/drug effects, Superoxides/chemistry, Trifolium/*chemistry | Phylogeny |
Biotechnology | 26147582 | Chemical Composition and Antioxidant and Antibacterial Activities of an Essential Oil Extracted from an Edible Seaweed, Laminaria japonica L. | Patra JK, Das G, Baek KH | Molecules | 10.3390/molecules200712093 | 2015 | Anti-Bacterial Agents/*pharmacology, Antioxidants/*pharmacology, Food Microbiology, Gas Chromatography-Mass Spectrometry, Laminaria/*chemistry, Microbial Sensitivity Tests, Oils, Volatile/*chemistry/isolation & purification/*pharmacology | Enzymology |
Metabolism | 28298443 | A four-gene operon in Bacillus cereus produces two rare spore-decorating sugars. | Li Z, Mukherjee T, Bowler K, Namdari S, Snow Z, Prestridge S, Carlton A, Bar-Peled M | J Biol Chem | 10.1074/jbc.M117.777417 | 2017 | Bacillus cereus/genetics/*metabolism, Bacterial Proteins/genetics/metabolism, Gene Knockdown Techniques, Methyltransferases/genetics/metabolism, Operon/*physiology, Oxidoreductases/genetics/metabolism, Polysaccharides, Bacterial/*biosynthesis/genetics, Spores, Bacterial/genetics/*metabolism | Enzymology |
Metabolism | 28349539 | Fermentation of sarshir (kaymak) by lactic acid bacteria: antibacterial activity, antioxidant properties, lipid and protein oxidation and fatty acid profile. | Hashemi SMB, Mousavi Khaneghah A, Kontominas MG, Es I, Sant'Ana AS, Martinez RR, Drider D | J Sci Food Agric | 10.1002/jsfa.8329 | 2017 | Animals, Anti-Bacterial Agents/chemistry/metabolism/*pharmacology, Antioxidants/*chemistry, Cattle, Dairy Products/analysis/*microbiology, Escherichia coli O157/drug effects, Fatty Acids/chemistry/metabolism, Fermentation, Lactobacillus plantarum/*metabolism, Lipids/chemistry, Milk/*chemistry/microbiology, Milk Proteins/*chemistry/metabolism/pharmacology, Oxidation-Reduction, Pseudomonas aeruginosa/drug effects, Staphylococcus aureus/drug effects | Pathogenicity |
28725151 | Chemical constituents of Helichrysum italicum (Roth) G. Don essential oil and their antimicrobial activity against Gram-positive and Gram-negative bacteria, filamentous fungi and Candida albicans. | Djihane B, Wafa N, Elkhamssa S, Pedro HJ, Maria AE, Mohamed Mihoub Z | Saudi Pharm J | 10.1016/j.jsps.2016.11.001 | 2016 | |||
Phylogeny | 29110155 | Streptomyces swartbergensis sp. nov., a novel tyrosinase and antibiotic producing actinobacterium. | le Roes-Hill M, Prins A, Meyers PR | Antonie Van Leeuwenhoek | 10.1007/s10482-017-0979-3 | 2017 | Anti-Bacterial Agents/*biosynthesis/isolation & purification/pharmacology, Bacteria/drug effects, DNA Gyrase/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Glycolipids/analysis, Melanins/analysis, Monophenol Monooxygenase/*biosynthesis, Peptidoglycan/analysis, Phospholipids/analysis, *Phylogeny, RNA, Ribosomal, 16S/genetics, Soil Microbiology, South Africa, Streptomyces/chemistry/*classification/enzymology/genetics, Vitamin K 2/analysis | Enzymology |
Phylogeny | 29377722 | Antibacterial Activities of Endophytic Bacteria Isolated from Taxus brevifolia Against Foodborne Pathogenic Bacteria. | Islam N, Choi J, Baek KH | Foodborne Pathog Dis | 10.1089/fpd.2017.2357 | 2018 | *Antibiosis, Bacillus cereus/growth & development, Endophytes/*isolation & purification/physiology, Escherichia coli/growth & development, Food Microbiology, Listeria monocytogenes/growth & development, Microbial Sensitivity Tests, Paenibacillus/isolation & purification/*physiology, Salmonella typhimurium/growth & development, Staphylococcus aureus/growth & development, Taxus/*microbiology | Enzymology |
Enzymology | 29486609 | Comparative study of the chemical profiling, antioxidant and antimicrobial activities of essential oils of different parts of Thymus willdenowii Boiss & Reut. | Ouknin M, Romane A, Costa J, Majidi L | Nat Prod Res | 10.1080/14786419.2018.1443089 | 2018 | Anti-Infective Agents/chemistry/isolation & purification/pharmacology, Antioxidants/chemistry/isolation & purification/pharmacology, Cyclohexane Monoterpenes, Cymenes, Microbial Sensitivity Tests, Monoterpenes/analysis, Oils, Volatile/*chemistry/pharmacology, Plant Oils/chemistry/pharmacology, Thymol/analysis, Thymus Plant/*chemistry | Phylogeny |
Pathogenicity | 30074257 | Insights into the antibiotic resistance and inhibition mechanism of aminoglycoside phosphotransferase from Bacillus cereus: In silico and in vitro perspective. | Parulekar RS, Sonawane KD | J Cell Biochem | 10.1002/jcb.27261 | 2018 | Amino Acid Sequence, Anti-Bacterial Agents/*pharmacology, Bacillus cereus/*drug effects/*metabolism, Kanamycin Kinase/*metabolism, Microbial Sensitivity Tests, Molecular Docking Simulation, Molecular Dynamics Simulation, Molecular Sequence Data, Principal Component Analysis, Substrate Specificity | Metabolism |
Pathogenicity | 30563220 | Silver Nanoparticles Synthesized by Using the Endophytic Bacterium Pantoea ananatis are Promising Antimicrobial Agents against Multidrug Resistant Bacteria. | Monowar T, Rahman MS, Bhore SJ, Raju G, Sathasivam KV | Molecules | 10.3390/molecules23123220 | 2018 | Anti-Infective Agents/chemical synthesis/*chemistry/pharmacology, Drug Resistance, Multiple, Bacterial/*drug effects, *Metal Nanoparticles/chemistry, Microbial Sensitivity Tests, Pantoea/*chemistry, *Silver | |
Phylogeny | 31268372 | Control of Foodborne Pathogenic Bacteria by Endophytic Bacteria Isolated from Ginkgo biloba L. | Islam MN, Choi J, Baek KH | Foodborne Pathog Dis | 10.1089/fpd.2018.2496 | 2019 | *Antibiosis, Bacillus cereus/growth & development, Bacillus subtilis/isolation & purification/*physiology, Endophytes/*isolation & purification/physiology, Escherichia coli/growth & development, Food Microbiology, Ginkgo biloba/*microbiology, Listeria monocytogenes/growth & development, Microbial Sensitivity Tests, Salmonella typhimurium/growth & development, Staphylococcus aureus/growth & development | Enzymology |
Pathogenicity | 32036166 | Antibacterial sesquiterpenes from the stems and roots of Thuja sutchuenensis. | Wang M, Zhao L, Chen K, Shang Y, Wu J, Guo X, Chen Y, Liu H, Tan H, Qiu SX | Bioorg Chem | 10.1016/j.bioorg.2020.103645 | 2020 | Anti-Bacterial Agents/*chemistry/isolation & purification/*pharmacology, Crystallography, X-Ray, Humans, Methicillin-Resistant Staphylococcus aureus/drug effects, Models, Molecular, Sesquiterpenes/*chemistry/isolation & purification/*pharmacology, Staphylococcal Infections/drug therapy, Staphylococcus aureus/drug effects, Staphylococcus epidermidis/drug effects, Thuja/*chemistry | Enzymology |
Phylogeny | 32494347 | Isolation and structure elucidation of phenazine derivative from Streptomyces sp. strain UICC B-92 isolated from Neesia altissima (Malvaceae). | Pratiwi RH, Hidayat I, Hanafi M, Mangunwardoyo W | Iran J Microbiol | 2020 | |||
33029146 | Characterization of Streptomyces Isolates Associated with Estuarine Fish Chanos chanos and Profiling of Their Antibacterial Metabolites-Crude-Extract. | Kurnianto MA, Kusumaningrum HD, Lioe HN | Int J Microbiol | 10.1155/2020/8851947 | 2020 | |||
33376830 | Jacaranda flower (Jacaranda mimosifolia) as an alternative for antioxidant and antimicrobial use. | Aguirre-Becerra H, Pineda-Nieto SA, Garcia-Trejo JF, Guevara-Gonzalez RG, Feregrino-Perez AA, Alvarez-Mayorga BL, Rivera Pastrana DM | Heliyon | 10.1016/j.heliyon.2020.e05802 | 2020 | |||
33917630 | Laurus nobilis, Salvia sclarea and Salvia officinalis Essential Oils and Hydrolates: Evaluation of Liquid and Vapor Phase Chemical Composition and Biological Activities. | Ovidi E, Laghezza Masci V, Zambelli M, Tiezzi A, Vitalini S, Garzoli S | Plants (Basel) | 10.3390/plants10040707 | 2021 | |||
33917798 | Endophytic Bacteria Enterobacter hormaechei Fabricated Silver Nanoparticles and Their Antimicrobial Activity. | Monowar T, Rahman MS, Bhore SJ, Sathasivam KV | Pharmaceutics | 10.3390/pharmaceutics13040511 | 2021 | |||
33953751 | The Antibacterial Activity of Crude Extracts of Secondary Metabolites from Bacterial Endophytes Associated with Dicoma anomala. | Makuwa SC, Serepa-Dlamini MH | Int J Microbiol | 10.1155/2021/8812043 | 2021 | |||
34686017 | Comparative Phytochemical Profile and Biological Activity of Four Major Medicinal Halophytes from Qassim Flora. | Mohammed HA, Ali HM, Qureshi KA, Alsharidah M, Kandil YI, Said R, Mohammed SAA, Al-Omar MS, Rugaie OA, Abdellatif AAH, Abd-Elmoniem E, Abbas MM, Mohany KM, Khan RA | Plants (Basel) | 10.3390/plants10102208 | 2021 |
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
3561 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 9378) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-9378 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
53496 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 36925) | https://www.ccug.se/strain?id=36925 | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
68371 | Automatically annotated from API 50CH acid | |||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |
70303 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID35299.1 | StrainInfo: A central database for resolving microbial strain identifiers |