Strain identifier

BacDive ID: 6030

Type strain: Yes

Species: Halomonas maura

Strain Designation: S-31

Strain history: CIP <- 2001, CECT <- 2000, V. Quesada

NCBI tax ID(s): 117606 (species)

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General

@ref: 5048

BacDive-ID: 6030

DSM-Number: 13445

keywords: 16S sequence, Bacteria, mesophilic, Gram-negative, rod-shaped, polysaccharide production

description: Halomonas maura S-31 is a mesophilic, Gram-negative, rod-shaped bacterium that produces polysaccharides and was isolated from soil of solar saltpan.

NCBI tax id

  • NCBI tax id: 117606
  • Matching level: species

strain history

@refhistory
5048<- CECT; S-31 <- E. Quesada
120862CIP <- 2001, CECT <- 2000, V. Quesada

doi: 10.13145/bacdive6030.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Oceanospirillales
  • family: Halomonadaceae
  • genus: Halomonas
  • species: Halomonas maura
  • full scientific name: Halomonas maura Bouchotroch et al. 2001

@ref: 5048

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Oceanospirillales

family: Halomonadaceae

genus: Halomonas

species: Halomonas maura

full scientific name: Halomonas maura Bouchotroch et al. 2001

strain designation: S-31

type strain: yes

Morphology

cell morphology

  • @ref: 120862
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
5048BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)yeshttps://mediadive.dsmz.de/medium/514Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514; with strain-specific modifications) Composition: NaCl 30.0 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
33737Marine agar (MA)yesDistilled water make up to (1000.000 ml);Marine agar (55.100 g)
120862CIP Medium 13yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13

culture temp

@refgrowthtypetemperaturerange
5048positivegrowth28mesophilic
33737positivegrowth30mesophilic
120862positivegrowth25-41
120862nogrowth5psychrophilic
120862nogrowth15psychrophilic

Physiology and metabolism

compound production

  • @ref: 5048
  • compound: exopolysaccharide

halophily

@refsaltgrowthtested relationconcentration
120862NaClnogrowth0 %
120862NaClnogrowth2 %
120862NaClnogrowth4 %
120862NaClnogrowth6 %
120862NaClnogrowth8 %
120862NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
12086216947citrate-carbon source
1208624853esculin-hydrolysis
120862606565hippurate-hydrolysis
12086217632nitrate-reduction
12086216301nitrite-reduction
12086215792malonate-assimilation
12086217632nitrate-respiration

metabolite production

  • @ref: 120862
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase+3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase-3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)-
68382esterase (C 4)-
68382alkaline phosphatase+3.1.3.1
120862oxidase-
120862beta-galactosidase+3.2.1.23
120862alcohol dehydrogenase-1.1.1.1
120862gelatinase-
120862amylase-
120862caseinase-3.4.21.50
120862catalase+1.11.1.6
120862tween esterase-
120862gamma-glutamyltransferase-2.3.2.2
120862lecithinase-
120862lipase-
120862lysine decarboxylase-4.1.1.18
120862ornithine decarboxylase-4.1.1.17
120862phenylalanine ammonia-lyase-4.3.1.24
120862tryptophan deaminase-
120862urease-3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
120862-+--------++--+-----

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
120862-------------------------------+---------------++++++++-----++++-++--+---------++++---+-++++-++-++-

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
5048soil of solar saltpanAsilahMoroccoMARAfrica
120862Solar jaltplantMoroccoMARAfrica

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Condition#Saline

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
50481Risk group (German classification)
1208621Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Halomonas maura partial 16S rRNA gene, strain S-31AJ2718641396ena117606
20218Halomonas maura partial 16S rRNA gene, strain S-31FN2577411455ena117606

External links

@ref: 5048

culture collection no.: DSM 13445, CECT 5298, CIP 107277

straininfo link

  • @ref: 75516
  • straininfo: 44245

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny11594589Halomonas maura sp. nov., a novel moderately halophilic, exopolysaccharide-producing bacterium.Bouchotroch S, Quesada E, Del Moral A, Llamas I, Bejar VInt J Syst Evol Microbiol10.1099/00207713-51-5-16252001Base Composition, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Genes, rRNA, Halomonas/*classification/genetics/metabolism, Molecular Sequence Data, Morocco, Nucleic Acid Hybridization, Phylogeny, Polysaccharides, Bacterial/*biosynthesis, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride, Soil MicrobiologyGenetics
Genetics15727823The moderately halophilic bacterium Halomonas maura is a free-living diazotroph.Argandona M, Fernandez-Carazo R, Llamas I, Martinez-Checa F, Caba JM, Quesada E, del Moral AFEMS Microbiol Lett10.1016/j.femsle.2005.01.0192005Base Sequence, DNA, Bacterial/genetics, Genes, Bacterial, Halomonas/genetics/growth & development/*metabolism, Molecular Sequence Data, Nitrogen Fixation/genetics, Oxidoreductases/genetics, Phylogeny, Soil MicrobiologyPhylogeny
Phylogeny21112990Halomonas stenophila sp. nov., a halophilic bacterium that produces sulphate exopolysaccharides with biological activity.Llamas I, Bejar V, Martinez-Checa F, Martinez-Canovas MJ, Molina I, Quesada EInt J Syst Evol Microbiol10.1099/ijs.0.026369-02010Bacterial Typing Techniques, Base Composition, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Genes, rRNA, Halomonas/*classification/genetics/*isolation & purification/metabolism, Hydrogen-Ion Concentration, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, Polysaccharides, Bacterial/*metabolism, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, Sodium Chloride/metabolism, Soil Microbiology, Sulfates/*metabolism, TemperatureMetabolism
Phylogeny22328606Halomonas smyrnensis sp. nov., a moderately halophilic, exopolysaccharide-producing bacterium.Poli A, Nicolaus B, Denizci AA, Yavuzturk B, Kazan DInt J Syst Evol Microbiol10.1099/ijs.0.037036-02012Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, Halomonas/*classification/genetics/isolation & purification, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, Polysaccharides, Bacterial/*biosynthesis, Ponds, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Turkey, Ubiquinone/analysisGenetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5048Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 13445)https://www.dsmz.de/collection/catalogue/details/culture/DSM-13445
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
33737Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/4695
68382Automatically annotated from API zym
75516Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID44245.1StrainInfo: A central database for resolving microbial strain identifiers
120862Curators of the CIPCollection of Institut Pasteur (CIP 107277)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107277