General

@ref: 2645

BacDive-ID: 5979

DSM-Number: 6640

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Halanaerobacter lacunarum Z-7888 is an anaerobe, mesophilic bacterium that was isolated from sediment.

NCBI tax id

• NCBI tax id: 46470
• Matching level: species

strain history

• @ref: 2645
• history: <- T. N. Zhilina, Z-7888

doi: 10.13145/bacdive5979.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Clostridia
• order: Halanaerobiales
• family: Halobacteroidaceae
• genus: Halanaerobacter
• species: Halanaerobacter lacunarum
• full scientific name: Halanaerobacter lacunarum corrig. (Zhilina et al. 1992) Rainey et al. 1995

• synonyms

  @ref	synonym
  20215	Haloanaerobacter lacunaris
  20215	Halanaerobacter lacunaris
  20215	Halobacteroides lacunaris

@ref: 2645

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Halanaerobiales

family: Halobacteroidaceae

genus: Halanaerobacter

species: Halanaerobacter lacunarum

full scientific name: Halanaerobacter lacunarum (Zhilina et al. 1992) Rainey et al. 1995

strain designation: Z-7888

type strain: yes

Culture and growth conditions

culture medium

• @ref: 2645
• name: HALOBACTEROIDES/HALOINCOLA MEDIUM (DSMZ Medium 591)
• growth: yes
• link: https://mediadive.dsmz.de/medium/591
• composition: Name: HALOBACTEROIDES/HALOINCOLA MEDIUM (DSMZ Medium 591; with strain-specific modifications) Composition: NaCl 125.0 g/l Glucose 5.0 g/l NaHCO3 1.5 g/l Na2S x 9 H2O 0.5 g/l Yeast extract 0.5 g/l KCl 0.33 g/l KH2PO4 0.33 g/l MgCl2 0.33 g/l CaCl2 0.33 g/l NH4Cl 0.33 g/l HCl 0.0025 g/l Resazurin 0.002 g/l FeCl2 x 4 H2O 0.0015 g/l CoCl2 x 6 H2O 0.00019 g/l Pyridoxine hydrochloride 0.0001 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l (DL)-alpha-Lipoic acid 5e-05 g/l p-Aminobenzoic acid 5e-05 g/l Calcium D-(+)-pantothenate 5e-05 g/l Nicotinic acid 5e-05 g/l Riboflavin 5e-05 g/l Thiamine HCl 5e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l Folic acid 2e-05 g/l Biotin 2e-05 g/l H3BO3 6e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Vitamin B12 1e-06 g/l Distilled water

culture temp

• @ref: 2645
• growth: positive
• type: growth
• temperature: 37
• range: mesophilic

Physiology and metabolism

oxygen tolerance

• @ref: 2645
• oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

• @ref: 2645
• sample type: sediment
• geographic location: Crimea, Lake Chokrak
• country: Ukraine
• origin.country: UKR
• continent: Europe

isolation source categories

Safety information

risk assessment

• @ref: 2645
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

External links

@ref: 2645

culture collection no.: DSM 6640, ATCC 49944

straininfo link

• @ref: 75468
• straininfo: 42769

literature

• topic: Phylogeny
• Pubmed-ID: 22003033
• title: Halanaerobacter jeridensis sp. nov., isolated from a hypersaline lake.
• authors: Mezghani M, Alazard D, Karray F, Cayol JL, Joseph M, Postec A, Fardeau ML, Tholozan JL, Sayadi S
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.036301-0
• year: 2011
• mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, Fermentation, Geologic Sediments/*microbiology, Gram-Negative Anaerobic Bacteria/*classification/genetics/isolation & purification, Lakes/*microbiology, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride, Tunisia, Water Microbiology
• topic2: Genetics

Reference