Strain identifier

BacDive ID: 5935

Type strain: Yes

Species: Haloferax lucentense

Strain Designation: Aa 2.2

Culture col. no.: DSM 14919, CCM 7023, CECT 5871, CIP 107410, JCM 9276

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 5.0 (current version):
version 4.1:
version 4.0:
version 3.0:
version 2.1:
version 2.0:
version 1.0:
version 5.0 (current version)

General

@ref: 5606

BacDive-ID: 5935

DSM-Number: 14919

keywords: Archaea, 16S sequence, genome sequence, mesophilic

description: Haloferax lucentense Aa 2.2 is a mesophilic archaeon that was isolated from water of a saltern.

strain history

doi: 10.13145/bacdive5935.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/euryarchaeota
  • domain: Archaea
  • phylum: Euryarchaeota
  • class: Halobacteria
  • order: Haloferacales
  • family: Haloferacaceae
  • genus: Haloferax
  • species: Haloferax lucentense
  • full scientific name: Haloferax lucentense corrig. Gutierrez et al. 2004
  • synonyms

    @refsynonym
    20215Haloferax lucentensis
    20215Haloferax alicantei

@ref: 5606

domain: Archaea

phylum: Euryarchaeota

class: Halobacteria

order: Halobacteriales

family: Haloferacaceae

genus: Haloferax

species: Haloferax lucentense

full scientific name: Haloferax lucentense Gutierrez et al. 2004

strain designation: Aa 2.2

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
5606HALOBACTERIA MEDIUM (DSMZ Medium 372)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium372.pdf
33788MEDIUM 204 - for Halorubrum, Marinococcus and NatrialbayesDistilled water make up to (1000.000 ml);Sodium chloride (200.000 g);Potassium chloride (2.000 g);ManganeseII chloride tetrahydrate (0.360 mg);Magnesium sulphate heptahydrate (20.000 g);Agar (20.000 g);Yeast extract (5.000 g);Ferrous chloride tetrahydrate

culture temp

@refgrowthtypetemperaturerange
5606positivegrowth37mesophilic
33788positivegrowth37mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 5606
  • sample type: water of a saltern
  • geographic location: Alicante
  • country: Spain
  • origin.country: ESP
  • continent: Europe

isolation source categories

Cat1Cat2
#Environmental#Aquatic
#Condition#Saline

Safety information

risk assessment

  • @ref: 5606
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Haloferax lucentense DSM 14919 strain Aa 2.2 16S ribosomal RNA gene, partial sequenceM33803394ena1230452
20218Haloferax lucentense DSM 14919 strain Aa 2.2 16S ribosomal RNA gene, partial sequenceM33804254ena1230452
20218Haloferax lucentense DSM 14919 strain Aa 2.2 16S ribosomal RNA gene, partial sequenceM33805539ena1230452
20218Haloferax lucentensis gene for 16S rRNAAB0817321473ena2254
5606Haloferax lucentense gene for 16S rRNA, complete sequence, strain: JCM 9276AB6633781473ena2254

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Haloferax lucentense DSM 14919GCA_000336795contigncbi1230452
66792Haloferax lucentense DSM 149191230452.3wgspatric1230452
66792Haloferax lucentense DSM 14919 strain Aa 2.21230452.7plasmidpatric1230452

External links

@ref: 5606

culture collection no.: DSM 14919, CCM 7023, CECT 5871, CIP 107410, JCM 9276

straininfo link

@refpassport
20218http://www.straininfo.net/strains/335737
20218http://www.straininfo.net/strains/335734
20218http://www.straininfo.net/strains/335735
20218http://www.straininfo.net/strains/335736
20218http://www.straininfo.net/strains/184989

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5606Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14919)https://www.dsmz.de/collection/catalogue/details/culture/DSM-14919
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
33788Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/4843
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)