Strain identifier

BacDive ID: 592

Type strain: No

Species: Bacillus amyloliquefaciens

Strain history: <- OUT, 8108 (Bacillus subtilis) <- IFO <- Ch. Matsumura, RTCI 306

NCBI tax ID(s): 1390 (species)

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General

@ref: 408

BacDive-ID: 592

DSM-Number: 1062

keywords: 16S sequence, Bacteria, mesophilic

description: Bacillus amyloliquefaciens DSM 1062 is a mesophilic bacterium of the family Bacillaceae.

NCBI tax id

  • NCBI tax id: 1390
  • Matching level: species

strain history

  • @ref: 408
  • history: <- OUT, 8108 (Bacillus subtilis) <- IFO <- Ch. Matsumura, RTCI 306

doi: 10.13145/bacdive592.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus amyloliquefaciens
  • full scientific name: Bacillus amyloliquefaciens (ex Fukomoto 1943) Priest et al. 1987

@ref: 408

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Bacillus

species: Bacillus amyloliquefaciens

full scientific name: Bacillus amyloliquefaciens (ex Fukumoto 1943) Priest et al. 1987 emend. Wang et al. 2008

type strain: no

Culture and growth conditions

culture medium

  • @ref: 408
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

  • @ref: 408
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

compound production

  • @ref: 408
  • compound: inhibitors for glycoside hydrolases

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_21.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_17;97_17;98_20;99_21&stattab=map
  • Last taxonomy: Bacillus
  • 16S sequence: AB679993
  • Sequence Identity:
  • Total samples: 18201
  • soil counts: 3768
  • aquatic counts: 2854
  • animal counts: 9674
  • plant counts: 1905

Safety information

risk assessment

  • @ref: 408
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Bacillus amyloliquefaciens gene for 16S rRNA, partial sequence, strain: NBRC 3034
  • accession: AB679993
  • length: 1475
  • database: ena
  • NCBI tax ID: 1390

External links

@ref: 408

culture collection no.: DSM 1062, IFO 3034, NBRC 3034, OUT 8108, RTCI 306

straininfo link

  • @ref: 70269
  • straininfo: 47309

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
408Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1062)https://www.dsmz.de/collection/catalogue/details/culture/DSM-1062
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
70269Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID47309.1StrainInfo: A central database for resolving microbial strain identifiers