Strain identifier
BacDive ID: 5914
Type strain: 
Species: Halobacterium sp.
Strain history: IAM 13174 <-- K. Horikoshi (Halobacterium cutirubrum).
NCBI tax ID(s): 69528 (species)
version 8.1 (current version)
General
@ref: 1461
BacDive-ID: 5914
DSM-Number: 3750
keywords: 16S sequence, Archaea, mesophilic
description: Halobacterium sp. DSM 3750 is a mesophilic archaeon of the family Halobacteriaceae.
NCBI tax id
- NCBI tax id: 69528
- Matching level: species
strain history
| @ref | history |
|---|---|
| 1461 | <- B.J. Tindall <- NCMB <- J.M. Shewan <- N.E. Gibbons <- A.G. Lochhead (Halobacterium cutirubrum) |
| 67770 | IAM 13174 <-- K. Horikoshi (Halobacterium cutirubrum). |
doi: 10.13145/bacdive5914.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Halobacteria
- order: Halobacteriales
- family: Halobacteriaceae
- genus: Halobacterium
- species: Halobacterium sp.
- full scientific name: Halobacterium Elazari-Volcani 1957 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Halobacter
@ref: 1461
domain: Archaea
phylum: Euryarchaeota
class: Halobacteria
order: Halobacteriales
family: Halobacteriaceae
genus: Halobacterium
species: Halobacterium sp.
full scientific name: Halobacterium sp.
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 1461 | HALOBACTERIA MEDIUM (DSMZ Medium 372) | yes | https://mediadive.dsmz.de/medium/372 | Name: HALOBACTERIA MEDIUM (DSMZ Medium 372) Composition: NaCl 200.0 g/l MgSO4 x 7 H2O 20.0 g/l Agar 20.0 g/l Yeast extract 5.0 g/l Casamino acids 5.0 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l Na glutamate 1.0 g/l FeCl2 x 4 H2O 0.036 g/l MnCl2 x 4 H2O 0.00036 g/l Distilled water |
| 1461 | HALOBACTERIUM MEDIUM (DSMZ Medium 97) | yes | https://mediadive.dsmz.de/medium/97 | Name: HALOBACTERIUM MEDIUM (DSMZ Medium 97) Composition: NaCl 250.0 g/l Agar 20.0 g/l MgSO4 x 7 H2O 20.0 g/l Yeast extract 10.0 g/l Casamino acids 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O 0.05 g/l MnSO4 x H2O 0.0002 g/l Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 1461 | positive | growth | 37 | mesophilic |
| 67770 | positive | growth | 37 | mesophilic |
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_191790.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17909;96_69573;97_91988;98_125006;99_191790&stattab=map
- Last taxonomy: Haloarchaeobius
- 16S sequence: AB073366
- Sequence Identity:
- Total samples: 22
- soil counts: 7
- aquatic counts: 15
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 1461 | Halobacterium cutirubrum NCIMB 763 gene for 16S rRNA, rrnB operon | AB073366 | 1472 | ena | 69528 |
| 1461 | Halobacterium cutirubrum NCIMB 763 gene for 16S rRNA, rrnA operon | AB073365 | 1472 | ena | 69528 |
External links
@ref: 1461
culture collection no.: DSM 3750, NCMB 763, JCM 20859, IAM 13174, NCIMB 763
straininfo link
- @ref: 75395
- straininfo: 47753
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 1461 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 3750) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-3750 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 75395 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47753.1 | StrainInfo: A central database for resolving microbial strain identifiers |