Strain identifier

BacDive ID: 5912

Type strain: Yes

Species: Halobacterium salinarum

Strain Designation: 91-R6

Culture col. no.: DSM 3754, ATCC 33171, JCM 8978, NCMB 764, NRC 34002

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 1340

BacDive-ID: 5912

DSM-Number: 3754

keywords: Archaea, 16S sequence, genome sequence, mesophilic

description: Halobacterium salinarum 91-R6 is a mesophilic archaeon that was isolated from salted cow hide.

strain history: <- B.J. Tindall <- NRC <- N.E. Gibbons <- A.G. Lochhead, 91-R6

doi: 10.13145/bacdive5912.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/euryarchaeota
  • domain: Archaea
  • phylum: Euryarchaeota
  • class: Halobacteria
  • order: Halobacteriales
  • family: Halobacteriaceae
  • genus: Halobacterium
  • species: Halobacterium salinarum
  • full scientific name: Halobacterium salinarum corrig. (Harrison and Kennedy 1922) Elazari-Volcani 1957 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Pseudomonas salinaria
    20215Bacterium halobium
    20215Halobacterium cutirubrum
    20215Halobacterium halobium
    20215Halobacterium salinarium
    20215Serratia cutirubrum
    20215Halobacterium piscisalsi

@ref: 1340

domain: Archaea

phylum: Euryarchaeota

class: Halobacteria

order: Halobacteriales

family: Halobacteriaceae

genus: Halobacterium

species: Halobacterium salinarum

full scientific name: Halobacterium salinarum (Harrison and Kennedy 1922) Elazari-Volcani 1957 emend. Gruber et al. 2004

strain designation: 91-R6

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlink
1340HALOBACTERIA MEDIUM (DSMZ Medium 372)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium372.pdf
1340HALOBACTERIUM MEDIUM (DSMZ Medium 97)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium97.pdf

culture temp

  • @ref: 1340
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 1340
  • sample type: salted cow hide

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body-Site#Organ#Skin, Nail, Hair
#Condition#Saline

Safety information

risk assessment

  • @ref: 1340
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Halobacterium salinarum gene for 16S rRNA, complete sequence, strain: JCM 8978AB6633621473ena2242
1340Halobacterium salinarum 16S rRNA gene, type strain DSM 3754TAJ4961851473ena2597657

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Halobacterium salinarum DSM 3754GCA_008124605contigncbi2597657
66792Halobacterium salinarum DSM 37542597657.4wgspatric2597657
66792Halobacterium salinarum strain 91-R62242.21completepatric2242

External links

@ref: 1340

culture collection no.: DSM 3754, ATCC 33171, JCM 8978, NCMB 764, NRC 34002

straininfo link

@refpassport
20218http://www.straininfo.net/strains/108969
20218http://www.straininfo.net/strains/108965
20218http://www.straininfo.net/strains/184559
20218http://www.straininfo.net/strains/151592
20218http://www.straininfo.net/strains/108966

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
1340Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 3754)https://www.dsmz.de/collection/catalogue/details/culture/DSM-3754
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)