Strain identifier

BacDive ID: 5911

Type strain: No

Species: Halobacterium salinarum

Strain Designation: R1

Culture col. no.: DSM 671, CCUG 24034

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 354

BacDive-ID: 5911

DSM-Number: 671

keywords: aerobe, Archaea, genome sequence, mesophilic

description: Halobacterium salinarum R1 is an aerobe, mesophilic archaeon of the family Halobacteriaceae.

strain history: <- D. Keradjopoulos <- W. Stoeckenius, R1

doi: 10.13145/bacdive5911.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/euryarchaeota
  • domain: Archaea
  • phylum: Euryarchaeota
  • class: Halobacteria
  • order: Halobacteriales
  • family: Halobacteriaceae
  • genus: Halobacterium
  • species: Halobacterium salinarum
  • full scientific name: Halobacterium salinarum corrig. (Harrison and Kennedy 1922) Elazari-Volcani 1957 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Pseudomonas salinaria
    20215Bacterium halobium
    20215Halobacterium cutirubrum
    20215Halobacterium halobium
    20215Halobacterium salinarium
    20215Serratia cutirubrum
    20215Halobacterium piscisalsi

@ref: 354

domain: Archaea

phylum: Euryarchaeota

class: Halobacteria

order: Halobacteriales

family: Halobacteriaceae

genus: Halobacterium

species: Halobacterium salinarum

full scientific name: Halobacterium salinarum (Harrison and Kennedy 1922) Elazari-Volcani 1957 emend. Gruber et al. 2004

strain designation: R1

type strain: no

Morphology

colony morphology

  • @ref: 47906
  • incubation period: 4 days

Culture and growth conditions

culture medium

@refnamegrowthlink
354HALOBACTERIA MEDIUM (DSMZ Medium 372)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium372.pdf
354HALOBACTERIUM MEDIUM (DSMZ Medium 97)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium97.pdf

culture temp

  • @ref: 354
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 47906
  • oxygen tolerance: aerobe

Safety information

risk assessment

  • @ref: 354
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Halobacterium salinarum R1 DSM 671 = R1GCA_000069025completencbi478009
66792Halobacterium salinarum R1478009.20completepatric478009
66792Halobacterium salinarum R1 strain DSM 671 = R1478009.35plasmidpatric478009
66792Halobacterium salinarum R1 strain DSM 671 = R1478009.38plasmidpatric478009
66792Halobacterium salinarum R1 strain DSM 671 = R1478009.36plasmidpatric478009
66792Halobacterium salinarum R1 strain DSM 671 = R1478009.37plasmidpatric478009

External links

@ref: 354

culture collection no.: DSM 671, CCUG 24034

straininfo link

  • @ref: 20218
  • passport: http://www.straininfo.net/strains/136569

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
354Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 671)https://www.dsmz.de/collection/catalogue/details/culture/DSM-671
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
47906Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 24034)https://www.ccug.se/strain?id=24034
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)