Strain identifier

BacDive ID: 5910

Type strain: No

Species: Halobacterium salinarum

Strain history: IAM 13167 <-- K. Horikoshi.

NCBI tax ID(s): 2242 (species)

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For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 353

BacDive-ID: 5910

DSM-Number: 670

keywords: genome sequence, Archaea, mesophilic

description: Halobacterium salinarum DSM 670 is a mesophilic archaeon of the family Halobacteriaceae.

NCBI tax id

  • NCBI tax id: 2242
  • Matching level: species

strain history

@refhistory
353<- D. Keradjopoulos <- W. Stoeckenius <- NRC
67770IAM 13167 <-- K. Horikoshi.

doi: 10.13145/bacdive5910.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/methanobacteriota
  • domain: Archaea
  • phylum: Methanobacteriota
  • class: Halobacteria
  • order: Halobacteriales
  • family: Halobacteriaceae
  • genus: Halobacterium
  • species: Halobacterium salinarum
  • full scientific name: Halobacterium salinarum corrig. (Harrison and Kennedy 1922) Elazari-Volcani 1957 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Serratia cutirubra
    20215Halobacterium cutirubrum
    20215Halobacterium halobium
    20215Bacterium halobium
    20215Halobacterium salinarium
    20215Halobacterium piscisalsi
    20215Pseudomonas salinaria
    20215Halobacter salinaria
    20215Halobacter cutirubrum

@ref: 353

domain: Archaea

phylum: Euryarchaeota

class: Halobacteria

order: Halobacteriales

family: Halobacteriaceae

genus: Halobacterium

species: Halobacterium salinarum

full scientific name: Halobacterium salinarum (Harrison and Kennedy 1922) Elazari-Volcani 1957 emend. Gruber et al. 2004

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
353HALOBACTERIA MEDIUM (DSMZ Medium 372)yeshttps://mediadive.dsmz.de/medium/372Name: HALOBACTERIA MEDIUM (DSMZ Medium 372) Composition: NaCl 200.0 g/l MgSO4 x 7 H2O 20.0 g/l Agar 20.0 g/l Yeast extract 5.0 g/l Casamino acids 5.0 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l Na glutamate 1.0 g/l FeCl2 x 4 H2O 0.036 g/l MnCl2 x 4 H2O 0.00036 g/l Distilled water
353HALOBACTERIUM MEDIUM (DSMZ Medium 97)yeshttps://mediadive.dsmz.de/medium/97Name: HALOBACTERIUM MEDIUM (DSMZ Medium 97) Composition: NaCl 250.0 g/l Agar 20.0 g/l MgSO4 x 7 H2O 20.0 g/l Yeast extract 10.0 g/l Casamino acids 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O 0.05 g/l MnSO4 x H2O 0.0002 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
353positivegrowth37mesophilic
67770positivegrowth37mesophilic

Safety information

risk assessment

  • @ref: 353
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

  • @ref: 66792
  • description: Halobacterium salinarum DSM 670
  • accession: 2596583669
  • assembly level: draft
  • database: img
  • NCBI tax ID: 2242

External links

@ref: 353

culture collection no.: DSM 670, JCM 20854, ATCC 43214, IAM 13167, NCMB 2152, NRC 34020

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Enzymology7764632Catalytic properties and potential of an extracellular protease from an extreme halophile.Ryu K, Kim J, Dordick JSEnzyme Microb Technol10.1016/0141-0229(94)90165-11994Amidohydrolases/antagonists & inhibitors/isolation & purification, Amino Acid Sequence, Bacterial Proteins/*isolation & purification/metabolism, Catalysis, Dimethylformamide/pharmacology, Endopeptidases/*isolation & purification/metabolism, Esterases/antagonists & inhibitors/isolation & purification, Extracellular Space/enzymology, Halobacterium salinarum/*enzymology, Hydrolysis, Kinetics, Molecular Sequence Data, Molecular Weight, Peptide Biosynthesis, Sodium Chloride/pharmacology, Substrate SpecificityPhylogeny
Phylogeny10427681Structural diversity of membrane lipids in members of Halobacteriaceae.Kamekura M, Kates MBiosci Biotechnol Biochem10.1271/bbb.63.9691999Halobacteriaceae/*chemistry/classification, Membrane Lipids/*chemistryLipids

Reference

@idauthorscataloguedoi/urltitle
353Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 670)https://www.dsmz.de/collection/catalogue/details/culture/DSM-670
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/