Strain identifier

BacDive ID: 5757

Type strain: Yes

Species: Frankia torreyi

Strain Designation: CPI 1, HFP 070701

Strain history: <- B. Bieber, University Jena, CpI 1 <- D. Hahn, ETH Zürich

NCBI tax ID(s): 1856 (species)

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General

@ref: 11635

BacDive-ID: 5757

DSM-Number: 44263

keywords: Bacteria, mesophilic

description: Frankia torreyi CPI 1 is a mesophilic bacterium that was isolated from Comptonia peregrina.

NCBI tax id

  • NCBI tax id: 1856
  • Matching level: species

strain history

  • @ref: 11635
  • history: <- B. Bieber, University Jena, CpI 1 <- D. Hahn, ETH Zürich

doi: 10.13145/bacdive5757.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Frankiales
  • family: Frankiaceae
  • genus: Frankia
  • species: Frankia torreyi
  • full scientific name: Frankia torreyi Nouioui et al. 2019

@ref: 11635

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Frankiaceae

genus: Frankia

species: Frankia torreyi

full scientific name: Frankia torreyi Nouioui et al. 2019

strain designation: CPI 1, HFP 070701

type strain: yes

Morphology

colony morphology

  • @ref: 11635
  • incubation period: >14 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
11635BAP+ MEDIUM FOR FRANKIA (DSMZ Medium 1536)yeshttps://mediadive.dsmz.de/medium/1536Name: BAP+ MEDIUM FOR FRANKIA (DSMZ Medium 1536) Composition: KH2PO4 0.95 g/l K2HPO4 0.6 g/l Na-propionate 0.48 g/l NH4Cl 0.27 g/l MgSO4 x 7 H2O 0.025 g/l Citric acid 0.01 g/l Eisencitrat 0.01 g/l CaCl2 x 2 H2O 0.01 g/l H3BO3 0.00286 g/l MnCl2 x 4 H2O 0.00181 g/l Pyridoxine hydrochloride 0.0005 g/l Nicotinic acid 0.0005 g/l ZnSO4 x 7 H2O 0.00022 g/l Thiamine HCl 0.0001 g/l CuSO4 x 5 H2O 8e-05 g/l Na2MoO4 x 2 H2O 2.5e-05 g/l CoSO4 x 7 H2O 1e-06 g/l Distilled water
11635DPM MEDIUM (DSMZ Medium 737)yeshttps://mediadive.dsmz.de/medium/737Name: DPM MEDIUM (DSMZ Medium 737) Composition: Na-propionate 1.2 g/l KH2PO4 1.0 g/l MgSO4 x 7 H2O 0.1 g/l Na2-EDTA 0.013608 g/l CaCl2 x 2 H2O 0.01 g/l FeSO4 x 7 H2O 0.009972 g/l H3BO3 0.00286 g/l MnCl2 x 4 H2O 0.00181 g/l ZnSO4 x 7 H2O 0.00022 g/l CuSO4 x 5 H2O 8e-05 g/l CoCl2 2.5e-05 g/l Na2MoO4 x 2 H2O 2.5e-05 g/l Distilled water

culture temp

  • @ref: 11635
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 11635
  • sample type: Comptonia peregrina
  • host species: Comptonia peregrina
  • geographic location: Massachusetts
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

  • Cat1: #Host
  • Cat2: #Plants
  • Cat3: #Herbaceous plants (Grass,Crops)

Sequence information

GC content

  • @ref: 11635
  • GC-content: 71.0

External links

@ref: 11635

culture collection no.: DSM 44263

straininfo link

  • @ref: 75236
  • straininfo: 50542

literature

  • topic: Phylogeny
  • Pubmed-ID: 30030730
  • title: Frankia torreyi sp. nov., the first actinobacterium of the genus Frankia Brunchorst 1886, 174(AL) isolated in axenic culture.
  • authors: Nouioui I, Ghodhbane-Gtari F, Jando M, Tisa LS, Klenk HP, Gtari M
  • journal: Antonie Van Leeuwenhoek
  • DOI: 10.1007/s10482-018-1131-8
  • year: 2018
  • mesh: Axenic Culture, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry/metabolism, Frankia/classification/genetics/*isolation & purification/metabolism, Myricaceae/microbiology, Phylogeny, RNA, Ribosomal, 16S/genetics, Root Nodules, Plant/*microbiology
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
11635Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44263)https://www.dsmz.de/collection/catalogue/details/culture/DSM-44263
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
75236Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID50542.1StrainInfo: A central database for resolving microbial strain identifiers