Strain identifier

BacDive ID: 561

Type strain: Yes

Species: Anoxybacillus mongoliensis

Strain Designation: T4

Strain history: <- Z. B. Namsaraev, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; T4

NCBI tax ID(s): 452565 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 7947

BacDive-ID: 561

DSM-Number: 19169

keywords: genome sequence, 16S sequence, Bacteria, spore-forming, thermophilic, motile

description: Anoxybacillus mongoliensis T4 is a spore-forming, thermophilic, motile bacterium that was isolated from alkaline hot spring Tsenher.

NCBI tax id

  • NCBI tax id: 452565
  • Matching level: species

strain history

  • @ref: 7947
  • history: <- Z. B. Namsaraev, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; T4

doi: 10.13145/bacdive561.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Anoxybacillus
  • species: Anoxybacillus mongoliensis
  • full scientific name: Anoxybacillus mongoliensis Namsaraev et al. 2011

@ref: 7947

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Anoxybacillus

species: Anoxybacillus mongoliensis

full scientific name: Anoxybacillus mongoliensis Namsaraev et al. 2011

strain designation: T4

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram stain
69480yes95.578
69480100positive

Culture and growth conditions

culture medium

  • @ref: 7947
  • name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/220
  • composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerangeconfidence
7947positivegrowth50thermophilic
69480thermophilic99.682

Physiology and metabolism

spore formation

@refspore formationconfidence
69481yes100
69480yes100

compound production

  • @ref: 7947
  • compound: alkaline proteinase

Isolation, sampling and environmental information

isolation

  • @ref: 7947
  • sample type: alkaline hot spring Tsenher
  • country: Mongolia
  • origin.country: MNG
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Thermal spring
#Condition#Alkaline
#Condition#Thermophilic (>45°C)

taxonmaps

  • @ref: 69479
  • File name: preview.99_4145.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_79;96_465;97_1979;98_2434;99_4145&stattab=map
  • Last taxonomy: Anoxybacillus
  • 16S sequence: EF654664
  • Sequence Identity:
  • Total samples: 1640
  • soil counts: 74
  • aquatic counts: 273
  • animal counts: 1269
  • plant counts: 24

Safety information

risk assessment

  • @ref: 7947
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 7947
  • description: Anoxybacillus mongoliensis strain T4 16S ribosomal RNA gene, partial sequence
  • accession: EF654664
  • length: 1452
  • database: ena
  • NCBI tax ID: 452565

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Anoxybacillus mongoliensis DSM 19169GCA_014201515scaffoldncbi452565
66792Anoxybacillus mongoliensis strain DSM 19169452565.7wgspatric452565
66792Anoxybacillus mongoliensis DSM 191692861210538draftimg452565

GC content

  • @ref: 7947
  • GC-content: 44.2
  • method: thermal denaturation, midpoint method (Tm)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingyes100no
flagellatedyes73.476no
gram-positiveyes85.707no
anaerobicno93.114no
aerobicyes51.303no
halophileno89.969no
spore-formingyes93.982no
glucose-utilyes90.965no
thermophileyes99.494yes
motileyes88.986no
glucose-fermentno86.975no

External links

@ref: 7947

culture collection no.: DSM 19169, VKM 2407, VKM B-2407

straininfo link

  • @ref: 70239
  • straininfo: 401631

literature

  • topic: Phylogeny
  • Pubmed-ID: 21058505
  • title: Anoxybacillus mongoliensis sp. nov., a novel thermophilic proteinase producing bacterium isolated from alkaline hot spring, central Mongolia.
  • authors: Namsaraev ZB, Babasanova OB, Dunaevsky YE, Akimov VN, Barkhutova DD, Gorlenko VM, Namsaraev BB
  • journal: Mikrobiologiia
  • year: 2010
  • mesh: Anoxybacillus/*classification/*enzymology/genetics/isolation & purification, Bacterial Proteins/*biosynthesis, Hot Springs/*microbiology, Hot Temperature, Molecular Sequence Data, Mongolia, Peptide Hydrolases, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Serine Proteases/*biosynthesis
  • topic2: Enzymology

Reference

@idauthorscataloguedoi/urltitle
7947Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19169)https://www.dsmz.de/collection/catalogue/details/culture/DSM-19169
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
70239Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID401631.1StrainInfo: A central database for resolving microbial strain identifiers