Strain identifier

BacDive ID: 5594

Type strain: Yes

Species: Aquimarina muelleri

Culture col. no.: DSM 19832, KCTC 12285, KMM 6020, LMG 22569

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General

@ref: 8340

BacDive-ID: 5594

DSM-Number: 19832

keywords: Bacteria, 16S sequence, genome sequence, mesophilic

description: Aquimarina muelleri DSM 19832 is a mesophilic bacterium that was isolated from sea-water sample.

strain history: <- O. I. Nedashkovskaya, Pacific Inst. Bioorg. Chem., RAS, Vladivostok; KMM 6020

doi: 10.13145/bacdive5594.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidetes
  • domain: Bacteria
  • phylum: Bacteroidetes
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Aquimarina
  • species: Aquimarina muelleri
  • full scientific name: Aquimarina muelleri Nedashkovskaya et al. 2005

@ref: 8340

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Aquimarina

species: Aquimarina muelleri

full scientific name: Aquimarina muelleri Nedashkovskaya et al. 2005 emend. Yu et al. 2013

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 8340
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium514.pdf

culture temp

  • @ref: 8340
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 8340
  • sample type: sea-water sample
  • geographic location: Sea of Japan, Gulf of Peter the Great, Amursky Bay
  • continent: Asia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Marine

Safety information

risk assessment

  • @ref: 8340
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 8340
  • description: Aquimarina muelleri strain KMM 6020 16S ribosomal RNA gene, partial sequence
  • accession: AY608406
  • length: 1427
  • database: ena
  • NCBI tax ID: 279356

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Aquimarina muelleri DSM 19832GCA_000430665scaffoldncbi1121007
66792Aquimarina muelleri DSM 198321121007.3wgspatric1121007
66792Aquimarina muelleri DSM 198322524023059permanentimg1121007

External links

@ref: 8340

culture collection no.: DSM 19832, KCTC 12285, KMM 6020, LMG 22569

straininfo link

@refpassport
20218http://www.straininfo.net/strains/764065
20218http://www.straininfo.net/strains/382642
20218http://www.straininfo.net/strains/378151
20218http://www.straininfo.net/strains/379370

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8340Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19832)https://www.dsmz.de/collection/catalogue/details/culture/DSM-19832
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)