Strain identifier
BacDive ID: 5548
Type strain:
Species: Flavobacterium granuli
Strain Designation: Kw05
Variant: Isotype of BacDive ID 5547
Strain history: <- JCM/RIKEN <- IAM <- S.-T. Lee, KAIST; Kw05
NCBI tax ID(s): 280093 (species)
General
@ref: 8268
BacDive-ID: 5548
DSM-Number: 19729
keywords: Bacteria, mesophilic
description: Flavobacterium granuli Kw05 is a mesophilic bacterium that was isolated from granules used in the wastewater treatment plant of a beer-brewing factory.
NCBI tax id
- NCBI tax id: 280093
- Matching level: species
strain history
- @ref: 8268
- history: <- JCM/RIKEN <- IAM <- S.-T. Lee, KAIST; Kw05
doi: 10.13145/bacdive5548.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Flavobacterium
- species: Flavobacterium granuli
- full scientific name: Flavobacterium granuli Aslam et al. 2005
@ref: 8268
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Flavobacterium
species: Flavobacterium granuli
full scientific name: Flavobacterium granuli Aslam et al. 2005 emend. Kim et al. 2014
strain designation: Kw05
variant: Isotype of BacDive ID 5547
type strain: yes
Culture and growth conditions
culture medium
- @ref: 8268
- name: R2A MEDIUM (DSMZ Medium 830)
- growth: yes
- link: https://mediadive.dsmz.de/medium/830
- composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
culture temp
- @ref: 8268
- growth: positive
- type: growth
- temperature: 27
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 8268
- sample type: granules used in the wastewater treatment plant of a beer-brewing factory
- geographic location: Kwang-Ju
- country: Republic of Korea
- origin.country: KOR
- continent: Asia
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Industrial | #Plant (Factory) |
#Engineered | #Waste | #Water treatment plant |
Safety information
risk assessment
- @ref: 8268
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
- @ref: 8268
- GC-content: 36.2
- method: high performance liquid chromatography (HPLC)
External links
@ref: 8268
culture collection no.: DSM 19729, IAM 15099, JCM 21560, KCTC 12201, NBRC 102009
literature
- topic: Phylogeny
- Pubmed-ID: 15774656
- title: Flavobacterium granuli sp. nov., isolated from granules used in a wastewater treatment plant.
- authors: Aslam Z, Im WT, Kim MK, Lee ST
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.63459-0
- year: 2005
- mesh: Bacterial Adhesion, *Beer, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Flavobacterium/chemistry/*classification/genetics/*isolation & purification, Genes, rRNA, *Industrial Waste, Korea, Molecular Sequence Data, Particle Size, Phenotype, Phylogeny, Polymers, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Waste Disposal, Fluid/*methods
- topic2: Genetics
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
8268 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19729) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-19729 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 |