Strain identifier

BacDive ID: 5548

Type strain: Yes

Species: Flavobacterium granuli

Strain Designation: Kw05

Variant: Isotype of BacDive ID 5547

Strain history: <- JCM/RIKEN <- IAM <- S.-T. Lee, KAIST; Kw05

NCBI tax ID(s): 280093 (species)

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General

@ref: 8268

BacDive-ID: 5548

DSM-Number: 19729

keywords: Bacteria, mesophilic

description: Flavobacterium granuli Kw05 is a mesophilic bacterium that was isolated from granules used in the wastewater treatment plant of a beer-brewing factory.

NCBI tax id

  • NCBI tax id: 280093
  • Matching level: species

strain history

  • @ref: 8268
  • history: <- JCM/RIKEN <- IAM <- S.-T. Lee, KAIST; Kw05

doi: 10.13145/bacdive5548.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Flavobacterium
  • species: Flavobacterium granuli
  • full scientific name: Flavobacterium granuli Aslam et al. 2005

@ref: 8268

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Flavobacterium

species: Flavobacterium granuli

full scientific name: Flavobacterium granuli Aslam et al. 2005 emend. Kim et al. 2014

strain designation: Kw05

variant: Isotype of BacDive ID 5547

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 8268
  • name: R2A MEDIUM (DSMZ Medium 830)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/830
  • composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

culture temp

  • @ref: 8268
  • growth: positive
  • type: growth
  • temperature: 27
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 8268
  • sample type: granules used in the wastewater treatment plant of a beer-brewing factory
  • geographic location: Kwang-Ju
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Engineered#Industrial#Plant (Factory)
#Engineered#Waste#Water treatment plant

Safety information

risk assessment

  • @ref: 8268
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

GC content

  • @ref: 8268
  • GC-content: 36.2
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 8268

culture collection no.: DSM 19729, IAM 15099, JCM 21560, KCTC 12201, NBRC 102009

literature

  • topic: Phylogeny
  • Pubmed-ID: 15774656
  • title: Flavobacterium granuli sp. nov., isolated from granules used in a wastewater treatment plant.
  • authors: Aslam Z, Im WT, Kim MK, Lee ST
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.63459-0
  • year: 2005
  • mesh: Bacterial Adhesion, *Beer, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Flavobacterium/chemistry/*classification/genetics/*isolation & purification, Genes, rRNA, *Industrial Waste, Korea, Molecular Sequence Data, Particle Size, Phenotype, Phylogeny, Polymers, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Waste Disposal, Fluid/*methods
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8268Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19729)https://www.dsmz.de/collection/catalogue/details/culture/DSM-19729
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880