Strain identifier
BacDive ID: 5525
Type strain: 
Species: Flavobacterium succinicans
Strain Designation: 14
Strain history: <- H. Reichenbach, Cy su1 <- J.T. Staley <- R.L. Anderson and E.J. Ordal, 14
NCBI tax ID(s): 29536 (species)
General
@ref: 1568
BacDive-ID: 5525
DSM-Number: 4001
keywords: 16S sequence, Bacteria, facultative anaerobe, mesophilic
description: Flavobacterium succinicans 14 is a facultative anaerobe, mesophilic bacterium that was isolated from lesion on an adult chinook salmon.
NCBI tax id
- NCBI tax id: 29536
- Matching level: species
strain history
- @ref: 1568
- history: <- H. Reichenbach, Cy su1 <- J.T. Staley <- R.L. Anderson and E.J. Ordal, 14
doi: 10.13145/bacdive5525.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Flavobacterium
- species: Flavobacterium succinicans
- full scientific name: Flavobacterium succinicans (Reichenbach 1989 ex Anderson and Ordal 1961) Bernardet et al. 1996
synonyms
- @ref: 20215
- synonym: Cytophaga succinicans
@ref: 1568
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Flavobacterium
species: Flavobacterium succinicans
full scientific name: Flavobacterium succinicans (Reichenbach 1989) Bernardet et al. 1996
strain designation: 14
type strain: no
Culture and growth conditions
culture medium
- @ref: 1568
- name: CY-AGAR (DSMZ Medium 67)
- growth: yes
- link: https://mediadive.dsmz.de/medium/67
- composition: Name: CY-AGAR (DSMZ Medium 67) Composition: Agar 15.0 g/l Casitone 3.0 g/l CaCl2 x 2 H2O 1.36 g/l Yeast extract 1.0 g/l Distilled water
culture temp
- @ref: 1568
- growth: positive
- type: growth
- temperature: 25-30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 1568
- oxygen tolerance: facultative anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 1568
- sample type: lesion on an adult chinook salmon
- geographic location: Idaho, Snake river
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Fishes | #Salmonidae |
| #Host Body-Site | #Other | #Wound |
Safety information
risk assessment
- @ref: 1568
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 1568
- description: Flavobacterium succinicans partial 16S rRNA gene, strain DSM 4001
- accession: AM230494
- length: 1503
- database: ena
- NCBI tax ID: 29536
GC content
| @ref | GC-content |
|---|---|
| 1568 | 38.0 |
| 1568 | 34.0 |
External links
@ref: 1568
culture collection no.: DSM 4001, Cy su1
straininfo link
- @ref: 75008
- straininfo: 47786
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 1568 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 4001) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-4001 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 75008 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47786.1 | StrainInfo: A central database for resolving microbial strain identifiers |