Strain identifier
BacDive ID: 5447
Type strain: 
Species: Eubacterium tortuosum
Strain history: <- ATCC <- L.V. Holdeman, VPI 1084B
NCBI tax ID(s): 39494 (species)
version 8.1 (current version)
General
@ref: 1557
BacDive-ID: 5447
DSM-Number: 3987
keywords: 16S sequence, Bacteria, anaerobe, human pathogen
description: Eubacterium tortuosum DSM 3987 is an anaerobe human pathogen that was isolated from turkey enteritis.
NCBI tax id
- NCBI tax id: 39494
- Matching level: species
strain history
- @ref: 1557
- history: <- ATCC <- L.V. Holdeman, VPI 1084B
doi: 10.13145/bacdive5447.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Eubacteriaceae
- genus: Eubacterium
- species: Eubacterium tortuosum
- full scientific name: Eubacterium tortuosum (Debono 1912) Prévot 1938 (Approved Lists 1980)
synonyms
@ref synonym 20215 Absiella tortuosa 20215 Absiella tortuosum 20215 Bacillus tortuosus
@ref: 1557
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Eubacteriaceae
genus: Eubacterium
species: Eubacterium tortuosum
full scientific name: Eubacterium tortuosum (Debono 1912) Prevot 1938
type strain: yes
Physiology and metabolism
oxygen tolerance
- @ref: 1557
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 1557
- sample type: turkey enteritis
isolation source categories
| Cat1 | Cat2 |
|---|---|
| #Infection | #Inflammation |
| #Host | #Birds |
| #Host Body-Site | #Gastrointestinal tract |
taxonmaps
- @ref: 69479
- File name: preview.99_98629.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_135;96_40122;97_51185;98_67488;99_98629&stattab=map
- Last taxonomy: Absiella tortuosum subclade
- 16S sequence: L34683
- Sequence Identity:
- Total samples: 11785
- soil counts: 194
- aquatic counts: 270
- animal counts: 11236
- plant counts: 85
Safety information
risk assessment
- @ref: 1557
- pathogenicity human: yes
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Eubacterium tortuosum strain ATCC 25548 16S ribosomal RNA gene, partial sequence
- accession: L34683
- length: 1485
- database: ena
- NCBI tax ID: 39494
External links
@ref: 1557
culture collection no.: DSM 3987, ATCC 25548, VPI 1084B
straininfo link
- @ref: 74935
- straininfo: 38591
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 28754474 | Description of Absiella argi gen. nov., sp. nov., and transfer of Eubacterium dolichum and Eubacterium tortuosum to the genus Absiella as Absiella dolichum comb. nov. and Absiella tortuosum comb. nov. | Paek J, Shin Y, Kim JS, Kim H, Kook JK, Paek WK, Chang YH | Anaerobe | 10.1016/j.anaerobe.2017.07.006 | 2017 | Animals, Bacterial Typing Techniques/*veterinary, Base Composition/genetics, Clostridium/*classification/genetics/isolation & purification, DNA, Bacterial/genetics, Dogs, Eubacterium/*classification/genetics/isolation & purification, Fatty Acids/analysis, Firmicutes/*classification/genetics/isolation & purification, Intestines/*microbiology, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Enzymology |
| Phylogeny | 32416738 | Amedibacterium intestinale gen. nov., sp. nov., isolated from human faeces, and reclassification of Eubacterium dolichum Moore et al. 1976 (Approved Lists 1980) as Amedibacillus dolichus gen. nov., comb. nov. | Ikeyama N, Toyoda A, Morohoshi S, Kunihiro T, Murakami T, Mori H, Iino T, Ohkuma M, Sakamoto M | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004215 | 2020 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Eubacterium/classification, Fatty Acids/chemistry, Feces/*microbiology, Firmicutes/*classification/isolation & purification, Humans, Japan, Nucleic Acid Hybridization, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Pathogenicity |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 1557 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 3987) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-3987 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 74935 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID38591.1 | StrainInfo: A central database for resolving microbial strain identifiers |