Strain identifier

BacDive ID: 5408

Type strain: Yes

Species: Acetobacterium fimetarium

Strain Designation: Z-4290, Z-M13

Strain history: <- A. N. Nozhevnikova; Z-M13

NCBI tax ID(s): 52691 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 3215

BacDive-ID: 5408

DSM-Number: 8238

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Acetobacterium fimetarium Z-4290 is an anaerobe, mesophilic bacterium that was isolated from cattle manure.

NCBI tax id

  • NCBI tax id: 52691
  • Matching level: species

strain history

  • @ref: 3215
  • history: <- A. N. Nozhevnikova; Z-M13

doi: 10.13145/bacdive5408.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Eubacteriaceae
  • genus: Acetobacterium
  • species: Acetobacterium fimetarium
  • full scientific name: Acetobacterium fimetarium Kotsyurbenko et al. 1997

@ref: 3215

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Eubacteriaceae

genus: Acetobacterium

species: Acetobacterium fimetarium

full scientific name: Acetobacterium fimetarium Kotsyurbenko et al. 1997

strain designation: Z-4290, Z-M13

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 3215
  • name: ACETOBACTERIUM TUNDRAE MEDIUM (DSMZ Medium 900)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/900
  • composition: Name: ACETOBACTERIUM TUNDRAE MEDIUM (DSMZ Medium 900; with strain-specific modifications) Composition: Na-(DL)-lactate 3.99202 g/l Na2CO3 1.49701 g/l Yeast extract 0.998004 g/l MgCl2 x 6 H2O 0.518962 g/l NH4Cl 0.329341 g/l KH2PO4 0.329341 g/l KCl 0.329341 g/l L-Cysteine HCl x H2O 0.299401 g/l CaCl2 x 2 H2O 0.299401 g/l Na2S x 9 H2O 0.299401 g/l HCl 0.00249501 g/l FeCl2 x 4 H2O 0.00149701 g/l Sodium resazurin 0.000499002 g/l Pyridoxine hydrochloride 0.000299401 g/l Nicotinic acid 0.000199601 g/l Thiamine-HCl x 2 H2O 0.000199601 g/l CoCl2 x 6 H2O 0.000189621 g/l Calcium pantothenate 9.98004e-05 g/l Vitamin B12 9.98004e-05 g/l MnCl2 x 4 H2O 9.98004e-05 g/l p-Aminobenzoic acid 7.98403e-05 g/l ZnCl2 6.98603e-05 g/l Na2MoO4 x 2 H2O 3.59281e-05 g/l NiCl2 x 6 H2O 2.39521e-05 g/l D-(+)-biotin 1.99601e-05 g/l H3BO3 5.98802e-06 g/l CuCl2 x 2 H2O 1.99601e-06 g/l Distilled water

culture temp

  • @ref: 3215
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 3215
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 3215
  • sample type: cattle manure
  • geographic location: near Moscow
  • country: Russia
  • origin.country: RUS
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body Product#Gastrointestinal tract#Feces (Stool)

Safety information

risk assessment

  • @ref: 3215
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 3215
  • description: A.fimetarium 16S rRNA gene
  • accession: X96959
  • length: 1469
  • database: ena
  • NCBI tax ID: 52691

GC content

  • @ref: 3215
  • GC-content: 45.6

External links

@ref: 3215

culture collection no.: DSM 8238

straininfo link

  • @ref: 74898
  • straininfo: 43183

Reference

@idauthorscataloguedoi/urltitle
3215Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 8238)https://www.dsmz.de/collection/catalogue/details/culture/DSM-8238
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
74898Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID43183.1StrainInfo: A central database for resolving microbial strain identifiers