Strain identifier
BacDive ID: 5403
Type strain: 
Species: Acetobacterium sp.
Strain history: <- B. Schink; Gra EG 12 (Acetobacterium woodii)
NCBI tax ID(s): 1872094 (species)
version 8.1 (current version)
General
@ref: 1074
BacDive-ID: 5403
DSM-Number: 2396
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Acetobacterium sp. DSM 2396 is an anaerobe, mesophilic bacterium that was isolated from mud.
NCBI tax id
- NCBI tax id: 1872094
- Matching level: species
strain history
- @ref: 1074
- history: <- B. Schink; Gra EG 12 (Acetobacterium woodii)
doi: 10.13145/bacdive5403.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Eubacteriaceae
- genus: Acetobacterium
- species: Acetobacterium sp.
- full scientific name: Acetobacterium Balch et al. 1977 (Approved Lists 1980)
@ref: 1074
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Eubacteriaceae
genus: Acetobacterium
species: Acetobacterium sp.
full scientific name: Acetobacterium sp.
type strain: no
Culture and growth conditions
culture medium
- @ref: 1074
- name: ACETOBACTERIUM MEDIUM (MARINE) (DSMZ Medium 135a)
- growth: yes
- link: https://mediadive.dsmz.de/medium/135a
- composition: Name: ACETOBACTERIUM MEDIUM (MARINE) (DSMZ Medium 135a) Composition: NaHCO3 4.89716 g/l Yeast extract 1.95886 g/l Ethylene glycol 1.22429 g/l NH4Cl 0.979432 g/l L-Cysteine HCl x H2O 0.489716 g/l Na2S x 9 H2O 0.489716 g/l K2HPO4 0.440744 g/l KH2PO4 0.323213 g/l MgSO4 x 7 H2O 0.0587659 g/l Nitrilotriacetic acid 0.029383 g/l NaCl 0.0195886 g/l MnSO4 x H2O 0.00979432 g/l CoSO4 x 7 H2O 0.00352595 g/l ZnSO4 x 7 H2O 0.00352595 g/l FeSO4 x 7 H2O 0.00195886 g/l CaCl2 x 2 H2O 0.00195886 g/l NiCl2 x 6 H2O 0.000587659 g/l Resazurin 0.000489716 g/l AlK(SO4)2 x 12 H2O 0.000391773 g/l CuSO4 x 5 H2O 0.000195886 g/l Na2MoO4 x 2 H2O 0.000195886 g/l H3BO3 0.000195886 g/l Pyridoxine hydrochloride 9.79432e-05 g/l (DL)-alpha-Lipoic acid 4.89716e-05 g/l Riboflavin 4.89716e-05 g/l Thiamine HCl 4.89716e-05 g/l Nicotinic acid 4.89716e-05 g/l Calcium D-(+)-pantothenate 4.89716e-05 g/l p-Aminobenzoic acid 4.89716e-05 g/l Biotin 1.95886e-05 g/l Folic acid 1.95886e-05 g/l Na2WO4 x 2 H2O 7.83546e-06 g/l Na2SeO3 x 5 H2O 5.87659e-06 g/l Vitamin B12 9.79432e-07 g/l Distilled water
culture temp
- @ref: 1074
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 1074
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 1074
- sample type: mud
- geographic location: Venice, Canale Grande
- country: Italy
- origin.country: ITA
- continent: Europe
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Mud (Sludge)
Sequence information
16S sequences
- @ref: 20218
- description: Acetobacterium woodii strain DSM 2396 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence
- accession: DQ834685
- length: 511
- database: ena
- NCBI tax ID: 33952
External links
@ref: 1074
culture collection no.: DSM 2396, Gra EG 12
straininfo link
- @ref: 74893
- straininfo: 47612
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 1074 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2396) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-2396 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 74893 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47612.1 | StrainInfo: A central database for resolving microbial strain identifiers |