Strain identifier

BacDive ID: 5400

Type strain: Yes

Species: Acetobacterium malicum

Strain Designation: MuME 1

Strain history: <- K. Tanaka, MuME 1

NCBI tax ID(s): 52692 (species)

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General

@ref: 1595

BacDive-ID: 5400

DSM-Number: 4132

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Acetobacterium malicum MuME 1 is an anaerobe, mesophilic bacterium that was isolated from ditch sediment.

NCBI tax id

  • NCBI tax id: 52692
  • Matching level: species

strain history

  • @ref: 1595
  • history: <- K. Tanaka, MuME 1

doi: 10.13145/bacdive5400.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Eubacteriaceae
  • genus: Acetobacterium
  • species: Acetobacterium malicum
  • full scientific name: Acetobacterium malicum Tanaka and Pfennig 1990

@ref: 1595

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Eubacteriaceae

genus: Acetobacterium

species: Acetobacterium malicum

full scientific name: Acetobacterium malicum Tanaka and Pfennig 1990

strain designation: MuME 1

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 1595
  • name: ACETOBACTERIUM MEDIUM (DSMZ Medium 135)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/135
  • composition: Name: ACETOBACTERIUM MEDIUM (DSMZ Medium 135; with strain-specific modifications) Composition: NaHCO3 9.79432 g/l Yeast extract 1.95886 g/l NH4Cl 0.979432 g/l D-Fructose 0.979432 g/l Na2S x 9 H2O 0.489716 g/l L-Cysteine HCl x H2O 0.489716 g/l K2HPO4 0.440744 g/l KH2PO4 0.323213 g/l MgSO4 x 7 H2O 0.0587659 g/l Nitrilotriacetic acid 0.029383 g/l NaCl 0.0195886 g/l MnSO4 x H2O 0.00979432 g/l CoSO4 x 7 H2O 0.00352595 g/l ZnSO4 x 7 H2O 0.00352595 g/l CaCl2 x 2 H2O 0.00195886 g/l FeSO4 x 7 H2O 0.00195886 g/l NiCl2 x 6 H2O 0.000587659 g/l Sodium resazurin 0.000489716 g/l AlK(SO4)2 x 12 H2O 0.000391773 g/l H3BO3 0.000195886 g/l CuSO4 x 5 H2O 0.000195886 g/l Na2MoO4 x 2 H2O 0.000195886 g/l Pyridoxine hydrochloride 9.79432e-05 g/l (DL)-alpha-Lipoic acid 4.89716e-05 g/l p-Aminobenzoic acid 4.89716e-05 g/l Calcium D-(+)-pantothenate 4.89716e-05 g/l Thiamine HCl 4.89716e-05 g/l Riboflavin 4.89716e-05 g/l Nicotinic acid 4.89716e-05 g/l Folic acid 1.95886e-05 g/l Biotin 1.95886e-05 g/l Na2WO4 x 2 H2O 7.83546e-06 g/l Na2SeO3 x 5 H2O 5.87659e-06 g/l Vitamin B12 9.79432e-07 g/l Distilled water

culture temp

  • @ref: 1595
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 1595
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 1595
  • sample type: ditch sediment
  • geographic location: Konstanz, Wollmatingen
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Sediment

taxonmaps

  • @ref: 69479
  • File name: preview.99_3721.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_30;96_1134;97_1330;98_1608;99_3721&stattab=map
  • Last taxonomy: Acetobacterium
  • 16S sequence: X96957
  • Sequence Identity:
  • Total samples: 1926
  • soil counts: 102
  • aquatic counts: 1132
  • animal counts: 647
  • plant counts: 45

Safety information

risk assessment

  • @ref: 1595
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 1595
  • description: A.malicum 16S rRNA gene
  • accession: X96957
  • length: 1469
  • database: ena
  • NCBI tax ID: 52692

External links

@ref: 1595

culture collection no.: DSM 4132

straininfo link

  • @ref: 74890
  • straininfo: 42855

Reference

@idauthorscataloguedoi/urltitle
1595Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 4132)https://www.dsmz.de/collection/catalogue/details/culture/DSM-4132
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
74890Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID42855.1StrainInfo: A central database for resolving microbial strain identifiers