Strain identifier
BacDive ID: 5400
Type strain:
Species: Acetobacterium malicum
Strain Designation: MuME 1
Strain history: <- K. Tanaka, MuME 1
NCBI tax ID(s): 52692 (species)
version 9.2 (current version)
General
@ref: 1595
BacDive-ID: 5400
DSM-Number: 4132
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Acetobacterium malicum MuME 1 is an anaerobe, mesophilic bacterium that was isolated from ditch sediment.
NCBI tax id
- NCBI tax id: 52692
- Matching level: species
strain history
- @ref: 1595
- history: <- K. Tanaka, MuME 1
doi: 10.13145/bacdive5400.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Eubacteriaceae
- genus: Acetobacterium
- species: Acetobacterium malicum
- full scientific name: Acetobacterium malicum Tanaka and Pfennig 1990
@ref: 1595
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Eubacteriaceae
genus: Acetobacterium
species: Acetobacterium malicum
full scientific name: Acetobacterium malicum Tanaka and Pfennig 1990
strain designation: MuME 1
type strain: yes
Culture and growth conditions
culture medium
- @ref: 1595
- name: ACETOBACTERIUM MEDIUM (DSMZ Medium 135)
- growth: yes
- link: https://mediadive.dsmz.de/medium/135
- composition: Name: ACETOBACTERIUM MEDIUM (DSMZ Medium 135; with strain-specific modifications) Composition: NaHCO3 9.79432 g/l Yeast extract 1.95886 g/l NH4Cl 0.979432 g/l D-Fructose 0.979432 g/l Na2S x 9 H2O 0.489716 g/l L-Cysteine HCl x H2O 0.489716 g/l K2HPO4 0.440744 g/l KH2PO4 0.323213 g/l MgSO4 x 7 H2O 0.0587659 g/l Nitrilotriacetic acid 0.029383 g/l NaCl 0.0195886 g/l MnSO4 x H2O 0.00979432 g/l CoSO4 x 7 H2O 0.00352595 g/l ZnSO4 x 7 H2O 0.00352595 g/l CaCl2 x 2 H2O 0.00195886 g/l FeSO4 x 7 H2O 0.00195886 g/l NiCl2 x 6 H2O 0.000587659 g/l Sodium resazurin 0.000489716 g/l AlK(SO4)2 x 12 H2O 0.000391773 g/l H3BO3 0.000195886 g/l CuSO4 x 5 H2O 0.000195886 g/l Na2MoO4 x 2 H2O 0.000195886 g/l Pyridoxine hydrochloride 9.79432e-05 g/l (DL)-alpha-Lipoic acid 4.89716e-05 g/l p-Aminobenzoic acid 4.89716e-05 g/l Calcium D-(+)-pantothenate 4.89716e-05 g/l Thiamine HCl 4.89716e-05 g/l Riboflavin 4.89716e-05 g/l Nicotinic acid 4.89716e-05 g/l Folic acid 1.95886e-05 g/l Biotin 1.95886e-05 g/l Na2WO4 x 2 H2O 7.83546e-06 g/l Na2SeO3 x 5 H2O 5.87659e-06 g/l Vitamin B12 9.79432e-07 g/l Distilled water
culture temp
- @ref: 1595
- growth: positive
- type: growth
- temperature: 30
Physiology and metabolism
oxygen tolerance
- @ref: 1595
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 1595
- sample type: ditch sediment
- geographic location: Konstanz, Wollmatingen
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Sediment
taxonmaps
- @ref: 69479
- File name: preview.99_3721.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_30;96_1134;97_1330;98_1608;99_3721&stattab=map
- Last taxonomy: Acetobacterium
- 16S sequence: X96957
- Sequence Identity:
- Total samples: 1926
- soil counts: 102
- aquatic counts: 1132
- animal counts: 647
- plant counts: 45
Safety information
risk assessment
- @ref: 1595
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 1595
- description: A.malicum 16S rRNA gene
- accession: X96957
- length: 1469
- database: nuccore
- NCBI tax ID: 52692
External links
@ref: 1595
culture collection no.: DSM 4132
straininfo link
- @ref: 74890
- straininfo: 42855
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
1595 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 4132) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-4132 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
74890 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID42855.1 | StrainInfo: A central database for resolving microbial strain identifiers |