Strain identifier

BacDive ID: 5399

Type strain: Yes

Species: Acetobacterium carbinolicum

Strain history: <- B. Eichler and B. Schink, WoProp1

NCBI tax ID(s): 52690 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 1251

BacDive-ID: 5399

DSM-Number: 2925

keywords: mesophilic, 16S sequence, anaerobe, Bacteria

description: Acetobacterium carbinolicum DSM 2925 is an anaerobe, mesophilic bacterium that was isolated from freshwater mud.

NCBI tax id

  • NCBI tax id: 52690
  • Matching level: species

strain history: <- B. Eichler and B. Schink, WoProp1

doi: 10.13145/bacdive5399.20211221.6

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/firmicutes
  • domain: Bacteria
  • phylum: Firmicutes
  • class: Clostridia
  • order: Eubacteriales
  • family: Eubacteriaceae
  • genus: Acetobacterium
  • species: Acetobacterium carbinolicum
  • full scientific name: Acetobacterium carbinolicum Eichler and Schink 1985

@ref: 1251

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Clostridiales

family: Eubacteriaceae

genus: Acetobacterium

species: Acetobacterium carbinolicum

full scientific name: Acetobacterium carbinolicum Eichler and Schink 1985 emend. Paarup et al. 2006

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 1251
  • name: DESULFOFARCIMEN MEDIUM (DSMZ Medium 124)
  • growth: yes
  • link: https://bacmedia.dsmz.de/medium/124
  • composition: Name: DESULFOFARCIMEN MEDIUM (DSMZ Medium 124; with strain-specific modifications) Composition: NaHCO3 4.5 g/l Na2SO4 2.84 g/l Na-butyrate 1.4 g/l NaCl 1.17 g/l Ethanol absolute 1.0 g/l Yeast extract 1.0 g/l MgCl2 x 6 H2O 0.4 g/l Na2S x 9 H2O 0.4 g/l KCl 0.3 g/l NH4Cl 0.27 g/l KH2PO4 0.2 g/l CaCl2 x 2 H2O 0.15 g/l HCl 0.0025 g/l FeCl2 x 4 H2O 0.0015 g/l Sodium resazurin 0.0005 g/l NaOH 0.0005 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 4 H2O 0.0001 g/l Pyridoxine hydrochloride 0.0001 g/l ZnCl2 7e-05 g/l Nicotinic acid 5e-05 g/l (±)-alpha-Lipoic acid 5e-05 g/l p-Aminobenzoic acid 5e-05 g/l Calcium D-(+)-pantothenate 5e-05 g/l Thiamine HCl 5e-05 g/l Riboflavin 5e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l Biotin 2e-05 g/l Folic acid 2e-05 g/l H3BO3 6e-06 g/l Na2WO4 x 2 H2O 4e-06 g/l Na2SeO3 x 5 H2O 3e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Vitamin B12 1e-06 g/l Distilled water

culture temp

  • @ref: 1251
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 1251
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 1251
  • sample type: freshwater mud
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Freshwater
#Environmental#Terrestrial#Mud (Sludge)

Safety information

risk assessment

  • @ref: 1251
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 1251
  • description: A.carbinolicum 16S rRNA gene
  • accession: X96956
  • length: 1469
  • database: ena
  • NCBI tax ID: 52690

GC content

  • @ref: 1251
  • GC-content: 38.5

External links

@ref: 1251

culture collection no.: DSM 2925, WoProp 1

straininfo link

  • @ref: 20218
  • passport: http://www.straininfo.net/strains/158227

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
1251Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2925)https://www.dsmz.de/collection/catalogue/details/culture/DSM-2925
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274